BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19396 (UTR included)
(2203 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 226 1e-58
BF01023A2A12 198 3e-50
BF01031B1E12 176 1e-43
BF01052B1H02 167 9e-41
BF01037B1H08 151 6e-36
BF01040A1G09 147 9e-35
BF01062A1A05 107 8e-23
BF01010B2F09 105 3e-22
>BF01056B1D02
Length = 778
Score = 226 bits (114), Expect = 1e-58
Identities = 155/168 (92%), Gaps = 3/168 (1%)
Strand = Plus / Plus
Query: 2009 acggtgaagaaaaacatcgtgaggaaacctggtcttataatttcagattgtaagattgaa 2068
||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 581 acggtgaaggaaaacgtcgtgaggaaacctggtcttataatttcaaattataagattgaa 640
Query: 2069 atcgccaacccctcttgagcaagcgtggtgattaagtctgtaaccttctccatgtgagaa 2128
||||||||||| |||||||||||||||||| |||| || ||||||| ||||||||||
Sbjct: 641 atcgccaacccgtcttgagcaagcgtggtggttaatgctctaacctt---catgtgagaa 697
Query: 2129 gaggcctttgctcagcagtgggctccgataggctgatgatgatgatga 2176
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 698 gaggcctttgctcagcagtgggctccgataggctgatgataatgatga 745
>BF01023A2A12
Length = 723
Score = 198 bits (100), Expect = 3e-50
Identities = 151/168 (89%)
Strand = Plus / Plus
Query: 2009 acggtgaagaaaaacatcgtgaggaaacctggtcttataatttcagattgtaagattgaa 2068
||||||||| | ||| ||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 180 acggtgaaggagaacgtcgtgaggaaacctggtcttataatttcaaattataagtttgaa 239
Query: 2069 atcgccaacccctcttgagcaagcgtggtgattaagtctgtaaccttctccatgtgagaa 2128
||| |||| | ||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 240 atcaccaatcagccttgagcgagcgtggtgattaatgctctaaccttctccatgtgataa 299
Query: 2129 gaggcctttgctcagcagtgggctccgataggctgatgatgatgatga 2176
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 300 gaggcctttgctcagcagtgagctccgataggctgatgatgatgatga 347
>BF01031B1E12
Length = 730
Score = 176 bits (89), Expect = 1e-43
Identities = 148/165 (89%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 2009 acggtgaagaaaaacatcgtgaggaaacctggtcttataattt-cagattgtaagattga 2067
||||||| | |||||||||||||||||||||||||||| ||| || | | |||||||||
Sbjct: 53 acggtgagggaaaacatcgtgaggaaacctggtcttatgattagcaaagtataagattga 112
Query: 2068 aatcgccaacccctcttgagcaagcgtggtgattaagtctgtaaccttctccatgtgaga 2127
|||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 113 aatcgccaacccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgaga 172
Query: 2128 agaggcctttgctcagcagtgggctccgataggctgatgatgatg 2172
|| || |||||||||||||||||||||||||||| |||||||||
Sbjct: 173 ag-gggatttgctcagcagtgggctccgataggcttatgatgatg 216
>BF01052B1H02
Length = 790
Score = 167 bits (84), Expect = 9e-41
Identities = 147/168 (87%)
Strand = Plus / Minus
Query: 2009 acggtgaagaaaaacatcgtgaggaaacctggtcttataatttcagattgtaagattgaa 2068
||||||||| ||||||||||||||||||||||||||||||||| | || | || |||||
Sbjct: 431 acggtgaaggaaaacatcgtgaggaaacctggtcttataatttgaaataattagtttgaa 372
Query: 2069 atcgccaacccctcttgagcaagcgtggtgattaagtctgtaaccttctccatgtgagaa 2128
||||||||||| |||||||||||||||||| |||| || |||| ||||||||| |||||
Sbjct: 371 atcgccaacccgtcttgagcaagcgtggtgcttaatgctctaactttctccatgggagaa 312
Query: 2129 gaggcctttgctcagcagtgggctccgataggctgatgatgatgatga 2176
|||| |||||||| |||||||||| ||| |||| |||||| ||||||
Sbjct: 311 aaggcgtttgctcaacagtgggctctgatgggctaatgatggtgatga 264
>BF01037B1H08
Length = 758
Score = 151 bits (76), Expect = 6e-36
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 2063 attgaaatcgccaacccctcttgagcaagcgtggtgattaagtctgtaaccttctccatg 2122
||||||||||||| ||| |||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 238 attgaaatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttctacatg 297
Query: 2123 tgagaagaggcctttgctcagcagtgggctccgataggctgatgatgatgat 2174
|||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 298 tgagaagaggcctttgctcagctgtgggctccgataggctgatggtgatgat 349
>BF01040A1G09
Length = 753
Score = 147 bits (74), Expect = 9e-35
Identities = 116/130 (89%)
Strand = Plus / Plus
Query: 2047 aatttcagattgtaagattgaaatcgccaacccctcttgagcaagcgtggtgattaagtc 2106
||||||| ||| |||| |||||||||||||||| |||||||||||||||| |||||| |
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagcaagcgtggcgattaatgc 69
Query: 2107 tgtaaccttctccatgtgagaagaggcctttgctcagcagtgggctccgataggctgatg 2166
| ||||||||||||| |||||||||| | ||||||||||||| |||||||||||||||
Sbjct: 70 ttaaaccttctccatgcgagaagaggcttatgctcagcagtggcttccgataggctgatg 129
Query: 2167 atgatgatga 2176
||||||||||
Sbjct: 130 atgatgatga 139
>BF01062A1A05
Length = 777
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 2081 tcttgagcaagcgtggtgattaagtctgtaaccttctccatgtgagaagaggcctttgct 2140
||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 513 tcttgagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggcctttgct 572
Query: 2141 cagcagtgggctcc 2154
|||||||||||||
Sbjct: 573 tagcagtgggctcc 586
>BF01010B2F09
Length = 764
Score = 105 bits (53), Expect = 3e-22
Identities = 97/111 (87%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 2067 aaatcgccaacccctcttgagcaagcgtggtgattaagtctgtaaccttctccatgtgag 2126
|||||||||| || |||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 366 aaatcgccaatccgtcttgagcgagcgtggtgattaatgctctaaccttctccatgtgag 307
Query: 2127 aagaggcctttgctcagcagtgggctccgataggctgatgatgatgatgaa 2177
|||| |||| |||||| | ||||||||| |||||| |||||||||||||
Sbjct: 306 aagacgcct---ctcagcggcgggctccgacaggctggtgatgatgatgaa 259
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,692
Number of extensions: 5465
Number of successful extensions: 5465
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 5456
Number of HSP's successfully gapped: 8
Length of query: 2203
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2186
Effective length of database: 8,119,229
Effective search space: 17748634594
Effective search space used: 17748634594
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)