BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19422 (UTR included)
(1825 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 194 3e-49
BF01060B1D11 149 2e-35
BF01031B1D09 117 6e-26
BF01054B2B08 109 2e-23
BF14_736_C1 92 4e-18
BF01048A1E10 90 1e-17
BF01026A1A12 82 4e-15
BF01059A2H01 80 1e-14
BF01056B1D01 72 3e-12
BF01011A1B08 72 3e-12
BF14_673_C1 72 3e-12
>BF01047B2H03
Length = 758
Score = 194 bits (98), Expect = 3e-49
Identities = 213/247 (86%), Gaps = 7/247 (2%)
Strand = Plus / Plus
Query: 148 gaattcaggggcgccattttaatgctaatgggatgcaaaaatctc-ctatgtaaaaacac 206
||||| ||| ||||||||||| ||||||||| ||| || |||| |||||| || |||
Sbjct: 407 gaattaaggtgcgccattttattgctaatggaatggaa---tctctctatgtctaaccac 463
Query: 207 tcgttctgcatctctaaactcattgcatagaatttatatttagcattctcgtcttgccaa 266
||||||||||| |||||||||||||||| || |||||| | ||||||||||||||| |
Sbjct: 464 tcgttctgcatatctaaactcattgcatggatgttatatccatcattctcgtcttgccga 523
Query: 267 ataaaagacttcaatatattcgtatcttgggccttcttacttgatcctaaccctactct- 325
||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 524 ataaaagacttcaatatatccgtatcttgggccttcttccttgatcctaatcctactctc 583
Query: 326 gttactttgtgctcctatgat--agtgtttatggaattgaaaacttaactctagctctgg 383
|||||||||||||||||| || | |||||||||||||||| ||| ||| ||| || ||
Sbjct: 584 gttactttgtgctcctatcataaactgtttatggaattgaagtcttgactttagttcagg 643
Query: 384 ggcatct 390
|||||||
Sbjct: 644 ggcatct 650
>BF01060B1D11
Length = 799
Score = 149 bits (75), Expect = 2e-35
Identities = 169/197 (85%), Gaps = 5/197 (2%)
Strand = Plus / Plus
Query: 149 aattcaggggcgccattttaatgctaatgggatgcaaaaatctc-ctatgtaaaaacact 207
|||| ||| ||||||||||| ||||||||| ||| || |||| |||||| || ||||
Sbjct: 236 aattaaggtgcgccattttattgctaatggaatggaa---tctctctatgtctaaccact 292
Query: 208 cgttctgcatctctaaactcattgcatagaatttatatttagcattctcgtcttgccaaa 267
|||||||||||||||||| |||||||| || |||||| | |||||||||||||| ||
Sbjct: 293 cgttctgcatctctaaacgcattgcatggatcttatatccatcattctcgtcttgctgaa 352
Query: 268 taaaagacttcaatatattcgtatcttgggccttcttacttgatcctaaccctactct-g 326
||||| |||||||||||| | ||||||| |||||||| ||||||||||| |||||||| |
Sbjct: 353 taaaatacttcaatatatccatatcttgagccttcttccttgatcctaatcctactctcg 412
Query: 327 ttactttgtgctcctat 343
|||||||||||||||||
Sbjct: 413 ttactttgtgctcctat 429
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 428 gagctccgatggcctatttatactcatcccaaaactattgcgatccct 475
||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 560 gagctccgatggcctttttagactcatcccaaaactattgcgatccct 607
>BF01031B1D09
Length = 754
Score = 117 bits (59), Expect = 6e-26
Identities = 181/222 (81%), Gaps = 11/222 (4%)
Strand = Plus / Minus
Query: 484 ggggcaacctaacaaacggcctacctgatggaggtagtaccgtcgcccatggacatccgc 543
||||||||| | || |||||| |||| ||||||||||||||||| |||||||||||||||
Sbjct: 754 ggggcaaccgagcagacggcc-accttatggaggtagtaccgtcacccatggacatccgc 696
Query: 544 aacatacatttgcgaatgtattgcctcccttgattaggaaagagggacaggaaaaagtgg 603
||||| |||||| |||| || || |||||||| || ||||||| ||||||| ||||
Sbjct: 695 aacatcgatttgcagatgtgtttcccgccttgattggggaagaggggaaggaaaaggtgg 636
Query: 604 gaaag----------gggaaagggcaaccggctctcgcactcatccgtcgaaacgcagcc 653
||||| |||||||||| ||||||||| ||||| || | ||||||||||||
Sbjct: 635 gaaagggagggaaaagggaaagggccgccggctctctcactcgtcggacgaaacgcagcc 576
Query: 654 attaaaggctgctatacgccgatcttctgcgagagggtggta 695
|| ||||||| || ||||||||| |||| ||||||||||||
Sbjct: 575 ataaaaggctacttcacgccgatcgtctgtgagagggtggta 534
>BF01054B2B08
Length = 807
Score = 109 bits (55), Expect = 2e-23
Identities = 88/99 (88%)
Strand = Plus / Minus
Query: 591 caggaaaaagtgggaaaggggaaagggcaaccggctctcgcactcatccgtcgaaacgca 650
||||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 746 caggaaagggtgggaacagggaaagggcaaccggctctctcactcatcgaacgaaacgca 687
Query: 651 gccattaaaggctgctatacgccgatcttctgcgagagg 689
|||||||||| ||||| ||||||||||||||| ||||||
Sbjct: 686 gccattaaagactgctttacgccgatcttctgtgagagg 648
>BF14_736_C1
Length = 796
Score = 91.7 bits (46), Expect = 4e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 610 ggaaagggcaaccggctctcgcactcatccgtcgaaacgcagccattaaaggctgctata 669
|||||||||||||||||||| ||||||| | ||||||||||||| ||||| || || |
Sbjct: 733 ggaaagggcaaccggctctctcactcattggacgaaacgcagccactaaagactacttca 674
Query: 670 cgccgatcttctgcgagagggtggta 695
||||||||||||| ||||||||||||
Sbjct: 673 cgccgatcttctgtgagagggtggta 648
>BF01048A1E10
Length = 804
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 527 cgcccatggacatccgcaacatacatttgcgaatgtattgcctcccttgattaggaaaga 586
||||||||||||||||||||||| ||||||||||| ||||| |||||| || |||||||
Sbjct: 479 cgcccatggacatccgcaacatagttttgcgaatgtgttgccacccttgtttgggaaaga 538
Query: 587 gggacaggaaaaagtgggaaa 607
|||| |||||| ||||||||
Sbjct: 539 gggataggaaagggtgggaaa 559
>BF01026A1A12
Length = 759
Score = 81.8 bits (41), Expect = 4e-15
Identities = 83/96 (86%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 600 gtgggaaaggggaaagggcaaccggctctcgcactcatccgtcgaaacgcagccattaaa 659
|||||||| ||| ||||||||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 516 gtgggaaaagggtaagggcaaccggctctc--actcatcagacgaaaaacagccattaaa 459
Query: 660 ggctgctatacgccgatcttctgcgagagggtggta 695
|||| || |||||||||||||| ||| ||||||||
Sbjct: 458 ggctacttcacgccgatcttctgggagggggtggta 423
>BF01059A2H01
Length = 865
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 604 gaaaggggaaagggcaaccggctctcgcactcatccgtcgaaacgcagccattaaaggct 663
|||| ||||||||||||| ||||||| |||||||| | ||| |||||||||||||| ||
Sbjct: 195 gaaaagggaaagggcaactggctctctcactcatcggaagaatcgcagccattaaagact 254
Query: 664 gctatacgccgatcttctgcgagagggtggta 695
|| | |||||||||||| ||||||||||||
Sbjct: 255 actccatgccgatcttctgtgagagggtggta 286
>BF01056B1D01
Length = 838
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 68 tcttactaaattactctgatatggaagagtcatttggaac 107
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 59 tcttactaaattactctgatttggaagagtcatttggaac 98
>BF01011A1B08
Length = 853
Score = 71.9 bits (36), Expect = 3e-12
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 600 gtgggaaaggggaaagggcaaccggctctcgcactcatccgtcgaaacgcagccattaaa 659
|||||||| |||||||||||| ||||| || || ||||| | |||||||||| ||||||
Sbjct: 19 gtgggaaaagggaaagggcaaacggctttctcattcatcagacgaaacgcagtcattaat 78
Query: 660 ggctgctatacgccgatcttctgcgagagggtggta 695
| || || |||||||||||||| |||||| |||||
Sbjct: 79 gactacttcacgccgatcttctgtgagaggatggta 114
>BF14_673_C1
Length = 1197
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 483 gggggcaacctaacaaacggcctacctgatggaggtagt-accgtcgcccatggacatcc 541
|||||||| | |||| ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 929 gggggcaaacgaacagacggcctacctgatggaggtagtcaccgtcgcttatggacatct 988
Query: 542 gcaacata 549
||||||||
Sbjct: 989 gcaacata 996
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 186,241
Number of extensions: 3144
Number of successful extensions: 3144
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 3140
Number of HSP's successfully gapped: 13
Length of query: 1825
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1808
Effective length of database: 8,119,229
Effective search space: 14679566032
Effective search space used: 14679566032
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)