BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19446 (UTR included)
(1453 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 127 5e-29
BF14_335_C2 115 2e-25
BF01056B2D01 80 1e-14
BF01044B1A07 80 1e-14
BF01014B2F02 78 4e-14
BF01048A1E04 72 3e-12
BF14_335_C4 72 3e-12
>BF01019A1H08
Length = 504
Score = 127 bits (64), Expect = 5e-29
Identities = 82/88 (93%)
Strand = Plus / Minus
Query: 812 ccaggtactgttgaagctcctgtccctgcaacgcgaaggacccggcacccccacggtgaa 871
||||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||
Sbjct: 451 ccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgcacggtgaa 392
Query: 872 tccattgaatgccaagaggtttcgtctc 899
|||||||||||| |||||||||| ||||
Sbjct: 391 tccattgaatgctaagaggtttcatctc 364
>BF14_335_C2
Length = 1827
Score = 115 bits (58), Expect = 2e-25
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 812 ccaggtactgttgaagctcctgtccctgcaacgcgaaggacccggcacccccacggtgaa 871
||||| ||||||||||||||| ||||||||||||| ||||||||||||| |||||||||
Sbjct: 895 ccaggcactgttgaagctcctctccctgcaacgcggcggacccggcacccgcacggtgaa 836
Query: 872 tccattgaatgccaagaggtttcgtctctt 901
||||| ||| || |||||||||||||||||
Sbjct: 835 tccatagaaagctaagaggtttcgtctctt 806
>BF01056B2D01
Length = 728
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 819 ctgttgaagctcctgtccctgcaacgcgaaggacccggcacccccacggtgaatccattg 878
|||||||||||||| ||||||||| | || ||||||||||||| |||||||||| ||| |
Sbjct: 156 ctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaattcatgg 97
Query: 879 aatgccaagaggtttcgtct 898
|||| |||||||||||||
Sbjct: 96 aatgttgagaggtttcgtct 77
>BF01044B1A07
Length = 806
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 821 gttgaagctcctgtccctgcaacgcgaaggacccggcacccccacggtgaatccattgaa 880
|||||||||||| ||||||| |||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 505 gttgaagctcctctccctgccacgcgatggacccgccacccgcacggtgaatccattgaa 446
>BF01014B2F02
Length = 623
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 823 tgaagctcctgtccctgcaacgcgaaggacccggcacccccacggtgaatccattgaatg 882
|||||||||| |||||||||||| ||||||||||||| ||||||| ||||| ||||||
Sbjct: 593 tgaagctcctctccctgcaacgct--ggacccggcacccgcacggtgcatccactgaatg 536
Query: 883 ccaagaggtttcgtctct 900
| |||||||||||||||
Sbjct: 535 ctgagaggtttcgtctct 518
>BF01048A1E04
Length = 789
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 841 aacgcgaaggacccggcacccccacggtgaatccattgaatgccaagaggtttcgtctct 900
||||||| ||||||||||||| |||||||||||||| ||| | ||||||||||||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaaagataagaggtttcgtctct 60
>BF14_335_C4
Length = 1491
Score = 71.9 bits (36), Expect = 3e-12
Identities = 76/88 (86%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 812 ccaggtactgttgaagctcctgtccctgcaacgcgaaggacccggcacccccacggtgaa 871
||||| ||||||||||||||| ||| |||||||||| || ||| ||| || |||||||||
Sbjct: 1278 ccaggcactgttgaagctcctctcc-tgcaacgcgatggtccccgcaaccgcacggtgaa 1336
Query: 872 tccattgaatgccaagaggtttcgtctc 899
||||| |||||| |||| |||||||||
Sbjct: 1337 tccatggaatgctgagagttttcgtctc 1364
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,105
Number of extensions: 5642
Number of successful extensions: 5642
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 5640
Number of HSP's successfully gapped: 7
Length of query: 1453
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1436
Effective length of database: 8,119,229
Effective search space: 11659212844
Effective search space used: 11659212844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)