BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19452 (UTR included)
(5383 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2322_C1 1608 0.0
>BF14_2322_C1
Length = 862
Score = 1608 bits (811), Expect = 0.0
Identities = 847/859 (98%)
Strand = Plus / Plus
Query: 3852 taccaaataccgactcaggcgcataagtgtgttctgagcaaaatagaacccgtcggcaag 3911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 taccaaataccgactcaggcgcataagtgtgttctgagcaaaatagaacccgtcggcaag 63
Query: 3912 aactgggacagaacgaccttggattatatacatagatcaatagtcgagaaaatatgtttc 3971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aactgggacagaacgaccttggattatatacatagatcaatagtcgagaaaatatgtttc 123
Query: 3972 gttaaagttagtggggaagcgataggcgatctggttcctatagaactaaagtacgacaag 4031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gttaaagttagtggggaagcgataggcgatctggttcctatagaactaaagtacgacaag 183
Query: 4032 ttgtgggtcaatgatcatctagtggagtttgagatggccaaatacacggacggctccgag 4091
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ctgtgggtcaatgatcatctagtggagtttgagatggccaaatacacggacggctccgag 243
Query: 4092 gccattgtaagaaaatacgccccagatataaaagataagaaagataaaaaagataaaaaa 4151
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 244 gccattgtaaggaaatacgccccagatataaaagataacaaagataaaaaagataaaaaa 303
Query: 4152 ccagaacagctaatagaatcagattccggcccagattatatcataggggacgataacgtt 4211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccagaacagctaatagaatcagattccggcccagattatatcataggggacgataacgtt 363
Query: 4212 gacacttcaacgacacacgattctataaatttaggctcattggatggcaaggactggaac 4271
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gacacttcgacgacacacgattctataaatttaggctcattggatggcaaggactggaac 423
Query: 4272 gaagtaatagaaatcgaagagaaccaaaacaacttcgtaacttacactccttatagtgaa 4331
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 424 gaagtaatagaaatcgaagacaaccaaaacaacttcgtaacttacacgccttatagtgaa 483
Query: 4332 agggagttcaaatgcacgataacggtactcaacgacgtcaacacactcgaactgaatatc 4391
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 484 agggagttcaaatgcacgataacggtactcaacgaagtcaacacactcgaactgaatatc 543
Query: 4392 gccttcgacgaccacgccgctaagacatacgaggacatgttcgcagaacttcagaatgat 4451
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 544 accttcgacgaccacgccgctaagacatacgaggacatgttcgcagagcttcagaatgat 603
Query: 4452 agctgtgatgcgattgggttgaatggtgtttttgagaacaaggcctgcgttgccctgttt 4511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agctgtgatgcgattgggttgaatggtgtttttgagaacaaggcctgcgttgccctgttt 663
Query: 4512 ccggatgacggtcaatggtatagagcctccattttacagtacagcagaacttcaaatagg 4571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ccggatgacggtcaatggtatagagcctccattttacagtacagcagaacttcaaatagg 723
Query: 4572 gtgaaagtcaaatatgtagattatggcaacattcaagtactatctctgagtgatgtcaga 4631
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 724 gtgaaagtcaaatatgtagattatggcaacattcaagtactatcactgactgatgtcaga 783
Query: 4632 gaaattgacaggaaatttgttgaactacccccggctaatttaaccgtgacgttgcacggt 4691
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 784 gaaattgacaggaaatttgttgaactacccccggctaatttaaccgtaacgttgcacggt 843
Query: 4692 gtgagaccgaatccgagca 4710
|||||||||||||||||||
Sbjct: 844 gtgagaccgaatccgagca 862
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 764,946
Number of extensions: 44291
Number of successful extensions: 44291
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 44289
Number of HSP's successfully gapped: 1
Length of query: 5383
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5365
Effective length of database: 8,109,745
Effective search space: 43508781925
Effective search space used: 43508781925
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)