BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19455 (UTR included)
(2002 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1296_C1 1661 0.0
>BF14_1296_C1
Length = 1072
Score = 1661 bits (838), Expect = 0.0
Identities = 868/878 (98%)
Strand = Plus / Plus
Query: 490 gtatagccaccatgtctttggacaatatgttctgcactcggtgcggagacggatttgaga 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gtatagccaccatgtctttggacaatatgttctgcactcggtgcggagacggatttgaga 254
Query: 550 ccaatgaaaagatagttaattctaatggagagctctggcatacaggatgttttgtgtgtg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccaatgaaaagatagttaattctaatggagagctctggcatacaggatgttttgtgtgtg 314
Query: 610 cccaatgcttccgtgtatttcctgatggcgtcttctttgaatttgaaggtcgtaaatact 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cccaatgcttccgtgtatttcctgatggcgtcttctttgaatttgaaggtcgtaaatact 374
Query: 670 gcgagcgtgatttccaagttttatttgcaccttgctgtggcaaatgtcgggaattcataa 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcgagcgtgatttccaagttttatttgcaccttgctgtggcaaatgtcgggaattcataa 434
Query: 730 ttggtcgtgtgataaaagcaatgaattccaactggcatccagcttgtttccgttgtgagg 789
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 435 ttggccgtgtgataaaagcaatgaattccaactggcatccagcttgtttccgttgcgagg 494
Query: 790 aatgtaacgctgaactagctgatgcagggtttattaaacacgccggtcgtgctttgtgcc 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatgtaacgctgaactagctgatgcagggtttattaaacacgccggtcgtgctttgtgcc 554
Query: 850 acgcttgtaacgcaagaatcaaggcggacggacttcagaactatatatgccacaaatgcc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 acgcttgtaacgcaagaatcaaggcggacggacttcagaactatatatgccacaaatgcc 614
Query: 910 atggtgtgatcgacggggagccgctccgttaccgaggtgaggtataccacggttatcatt 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 atggtgtgatcgacggggagccgctccgttaccgaggtgaggtataccacggttatcatt 674
Query: 970 tcacgtgtgcaacctgcggcctagagttggaccacaccgcccgcgaggtgaaaaaccggc 1029
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 675 tcacgtgtgcaacctgcggcctaaagttggaccacaccgcccgcgaggtgaaaaaccggc 734
Query: 1030 ctggatacgctgccaatgacgtgaataatctattctgcctccgttgtcatgataaaatgg 1089
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctcgatacactgccaatgacgtgaataatctattctgcctccgttgtcatgataaaatgg 794
Query: 1090 gtatacccatttgtggagcttgtcgccgccctatcgaagaaagaattgttactgctttgg 1149
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 795 gtatacccatttgtggagcttgtcgccgccctatcgaagaaagaatcgttactgctttgg 854
Query: 1150 gaaaacattggcatgttgagcacttcgtgtgtgccaaatgtgagaaaccgttccacggtc 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gaaaacattggcatgttgagcacttcgtgtgtgccaaatgtgagaaaccgttccacggtc 914
Query: 1210 atagacactacgagaagaagggacttgcgtactgcgaacaacactatcaccagctgttcg 1269
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 atagacactaccataagaagggacttgcgtactgcgaacaacactatcaccagctgttcg 974
Query: 1270 gcaacctgtgctatgtttgcaaccaagttatcgcaggagatgttttcaccgcattgaaca 1329
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 975 gcaacctgtgctatgtttgcaaccaagttatcgcatgagatgttttcaccgcgttgaaca 1034
Query: 1330 aagcatggtgcgttcatcatttcgcgtgcgcggtctgt 1367
||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 aagcatggtgcgttcatcatttcgcgtgcgcggtctgt 1072
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,118
Number of extensions: 8492
Number of successful extensions: 8492
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8492
Number of HSP's successfully gapped: 1
Length of query: 2002
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1985
Effective length of database: 8,119,229
Effective search space: 16116669565
Effective search space used: 16116669565
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)