BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19458 (UTR included)
(1444 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B1C01 1374 0.0
>BF01051B1C01
Length = 777
Score = 1374 bits (693), Expect = 0.0
Identities = 761/782 (97%), Gaps = 5/782 (0%)
Strand = Plus / Plus
Query: 344 atttgtcagcgattttgtgtttatttacaaaaaaaaaatttttgtataaataataaagta 403
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1 atttgtcagcgattttgtgtttatttacaaaaaatatttttttgtataaataataaagta 60
Query: 404 cactgagtgtttaaataattttacatatgagttgttttgtttgtgcttaaattgtttcgg 463
|| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 61 ca----gtgtttaaataattttacatatgagttgttttgtttgtgcttaagttgtttagg 116
Query: 464 atttccatacttaatactgtaaataagtatcataacaatgacagattattttcaagaaat 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atttccatacttaatactgtaaataagtatcataacaatgacagattattttcaagaaat 176
Query: 524 gggatggagagaattagaagacggtgaacagcctaaccatttactgcatatggctagatt 583
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 177 gggatggagagaattagaagacggtgaacagcctaaccatttactgcatatggccagatt 236
Query: 584 tttaatagattttggaatgtatgatgacaactttacgggagaatggccaaggttgccacc 643
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 237 tttaatagattttggaatgtatgatgacaactttacaggagaatggccaaggttgccacc 296
Query: 644 tccagcttcaaaagaatcagtaaaaaatttaaaagaagtcaaaatagaagatgaaaatca 703
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 297 tccagcttcaaaagaatcagtaaaaaatttaaaagaagtcaaaatggaagttgaaaatca 356
Query: 704 gaattgtccaatatgcttaaagaaattcaatattaatgatactgcaaaagaaatgccatg 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gaattgtccaatatgcttaaagaaattcaatattaatgatactgcaaaagaaatgccatg 416
Query: 764 tcatcatttgtttcatgagaaatgtattttaacatggttaaatcagaccaattcatgtcc 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcatcatttgtttcatgagaaatgtattttaacatggttaaatcagaccaattcatgtcc 476
Query: 824 attttgtcgtcatgaacttcctacagacaatgaaggctatgaagctttcaagaaggaaaa 883
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 477 attttgtcgtcatgaacttcctacggacaatgaaggctatgaagctttcaagaaggaaaa 536
Query: 884 gaagagatcggaacagagaaaagaagatatagaagctttacataattctatgtttagtta 943
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aaagagatcggaacagagaaaagaagatatagaagctttacataattctatgtttagtta 596
Query: 944 acatttgaaactaaataataataatttaatttgtttttctttataaataatataatttcg 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 acatttgaaactaaataataataatttaatttgtttttctttataaataatataatttcg 656
Query: 1004 aaattgttttcaaagtttttttttatacatatgatatcagtatgtttacttatgtctttg 1063
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 657 aaattgttttcaaa-tttttttttattcatatgatatcagtatgtttacttatgtctttg 715
Query: 1064 gtaatggttattatttattattgtcatgttaatatataatttgttttaatctttggtttc 1123
|||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||||
Sbjct: 716 gtaatggttattatttattattgttatgttcatacataatttgttttaatgtttggtttc 775
Query: 1124 ta 1125
||
Sbjct: 776 ta 777
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 309,066
Number of extensions: 9023
Number of successful extensions: 9023
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9021
Number of HSP's successfully gapped: 1
Length of query: 1444
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1427
Effective length of database: 8,119,229
Effective search space: 11586139783
Effective search space used: 11586139783
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)