BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19461 (UTR included)
(1498 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3342_C1 1626 0.0
>BF14_3342_C1
Length = 825
Score = 1626 bits (820), Expect = 0.0
Identities = 823/824 (99%)
Strand = Plus / Plus
Query: 389 ggtgcttagaattttaatcattgcaaattaaattgtagtttttgaaatagattgtgttcg 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtgcttagaattttaatcattgcaaattaaattgtagtttttgaaatagattgtgttcg 61
Query: 449 ggcaattcttaatcgcagcatatcttgtggaatttctcacgtgtgttgaaaaatggcggg 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggcaattcttaatcgcagcatatcttgtggaatttctcacgtgtgttgaaaaatggcggg 121
Query: 509 tgaagctccagtacctcctcccgtattatgggcacaacgtaaggaagtaatttttcttac 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgaagctccagtacctcctcccgtattatgggcacaacgtaaggaagtaatttttcttac 181
Query: 569 atttagcgtggaaactaaggatccaactattaaaatagaaaaagagtctgtctatttcaa 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atttagcgtggaaactaaggatccaactattaaaatagaaaaagagtctgtctatttcaa 241
Query: 629 aggcgtgaacgtccctaacaataaagcccacgaggtgactatacaattacacgacgctat 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggcgtgaacgtccctaacaataaagcccacgaggtgactatacaattacacgacgctat 301
Query: 689 tattcctgaaaatagcagcttcgtaaataaaggtcgttgcatagaaatggttcttaaaaa 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tattcctgaaaatagcagcttcgtaaataaaggtcgttgcatagaaatggttcttaaaaa 361
Query: 749 agaaaaaacagacgcagcctactggccgtccctaaccaaagataggaagcctcattatct 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agaaaaaacagacgcagcctactggccgtccctaaccaaagataggaagcctcattatct 421
Query: 809 taagatagattttaataaatggaaggatgaagacgacgaagacgaagctgctggtggggg 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 taagatagattttaataaatggaaggatgaagacgacgaagacgaagctgctggtggggg 481
Query: 869 tggtggagattttgacatcgaagacatgcttaagtcgatgggtcaaggagccggagacaa 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tggtggagattttgacatcgaagacatgcttaagtcgatgggtcaaggagccggagacaa 541
Query: 929 aggtggaaagccagtttttgacgacatggaaagcgactccgatgacgaaaacttacctga 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aggtggaaagccagtttttgacgacatggaaagcgactccgatgacgaaaacttacctga 601
Query: 989 tcttgaatgaggcctttagtactaatgcttactttttaaaacaatacattatgtatatta 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tcttgaatgaggcctttagtactaatgcttactttttaaaacaatacattatgtatatta 661
Query: 1049 aggtttttacagttataataaaatcattttaaaagatggatattgtttctctgggtatcc 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aggtttttacagttataataaaatcattttaaaagatggatattgtttctctgggtatcc 721
Query: 1109 aatatagatctagtgatatattgcatttttgtatctattgttgctctaaatttgccgaag 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aatatagatctagtgatatattgcatttttgtatctattgttgctctaaatttgccgaag 781
Query: 1169 aagtagaacaaattaattctttggtatattgttacagttctcgt 1212
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 782 aagtagaacaaattaattctttgatatattgttacagttctcgt 825
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,105
Number of extensions: 6864
Number of successful extensions: 6864
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6864
Number of HSP's successfully gapped: 1
Length of query: 1498
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1481
Effective length of database: 8,119,229
Effective search space: 12024578149
Effective search space used: 12024578149
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)