BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19467 (UTR included)
(3112 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 285 2e-76
BF01056B1D02 272 3e-72
BF01052B1H02 210 1e-53
BF01031B1E12 178 3e-44
BF01037B1H08 168 3e-41
BF01029B2F12 151 8e-36
BF01010B2F09 151 8e-36
BF01040A1G09 143 2e-33
BF01062A1A05 121 7e-27
>BF01023A2A12
Length = 723
Score = 285 bits (144), Expect = 2e-76
Identities = 261/295 (88%), Gaps = 5/295 (1%)
Strand = Plus / Minus
Query: 280 atcatcatcatcagcctatcagagcccactgctaagcaaaggcctcttctcacacagaga 339
|||||||||||||||||||| |||| ||||||| |||||||||||||| ||||| ||||
Sbjct: 345 atcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatggaga 286
Query: 340 aggttagagcattcatcaccacgcttgctcaagaagggttggcgatttcaaacttataat 399
||||||||||||| ||||||||||| ||||||| | |||| |||||||||||||||||
Sbjct: 285 aggttagagcattaatcaccacgctcgctcaaggctgattggtgatttcaaacttataat 226
Query: 400 ttgaaattgtaagtccaggtttccttacgatgttttccttcaccgtctgtcagtgatgtc 459
|||||||| |||| ||||||||||| |||| ||| |||||||||||| ||||||| ||||
Sbjct: 225 ttgaaattataagaccaggtttcctcacgacgttctccttcaccgtccgtcagtggtgtc 166
Query: 460 taaatattgttagaaagtacatatgactatgaaaa-atcacaatggtacttgccaggttt 518
|||||| ||||||||||||||| ||||| ||||| |||||| |||||||||||||||||
Sbjct: 165 taaatactgttagaaagtacatgtgactcggaaaagatcacattggtacttgccaggttt 106
Query: 519 cgaacccgcgccctcacccatgagaggcggacctttaacctccaggccaccacga 573
| |||||||||||||| | ||| ||||| |||||||||| |||||||||||||
Sbjct: 105 c-aacccgcgccctca--cgtgatgggcgg-cctttaaccttcaggccaccacga 55
>BF01056B1D02
Length = 778
Score = 272 bits (137), Expect = 3e-72
Identities = 260/295 (88%), Gaps = 12/295 (4%)
Strand = Plus / Minus
Query: 280 atcatcatcatcagcctatcagagcccactgctaagcaaaggcctcttctcacacagaga 339
||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||
Sbjct: 743 atcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacat---ga 687
Query: 340 aggttagagcattcatcaccacgcttgctcaagaagggttggcgatttcaaacttataat 399
||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 686 aggttagagcattaaccaccacgcttgctcaagacgggttggcgatttcaatcttataat 627
Query: 400 ttgaaattgtaagtccaggtttccttacgatgttttccttcaccgtctgtcagtgatgtc 459
|||||||| |||| ||||||||||| |||| ||||||||||||| ||||||| ||||
Sbjct: 626 ttgaaattataagaccaggtttcctcacgacgttttccttcacc----gtcagtggtgtc 571
Query: 460 taaatattgttagaaagtacatatgactatgaaaa-atcacaatggtacttgccaggttt 518
||| || ||||||||||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 570 taactacccttagaaagtacatatgactcggaaaagatcacattggtacttgccaggttt 511
Query: 519 cgaacccgcgccctcacccatgagaggcggacctttaacctccaggccaccacga 573
| |||||||||||||| | ||| ||||| ||||||||||||||||||||||||
Sbjct: 510 c-aacccgcgccctca--cgtgatgggcgg-cctttaacctccaggccaccacga 460
>BF01052B1H02
Length = 790
Score = 210 bits (106), Expect = 1e-53
Identities = 249/296 (84%), Gaps = 3/296 (1%)
Strand = Plus / Plus
Query: 280 atcatcatcatcagcctatcagagcccactgctaagcaaaggcctcttctcacacagaga 339
|||| |||||| |||| |||||||||||||| | |||||| |||| ||||| || ||||
Sbjct: 266 atcaccatcattagcccatcagagcccactgttgagcaaacgccttttctcccatggaga 325
Query: 340 aggttagagcattcatcaccacgcttgctcaagaagggttggcgatttcaaacttataat 399
| ||||||||||| | |||||||||||||||||| ||||||||||||||||||| || ||
Sbjct: 326 aagttagagcattaagcaccacgcttgctcaagacgggttggcgatttcaaactaattat 385
Query: 400 ttgaaattgtaagtccaggtttccttacgatgttttccttcaccgtctgtcagtgatgtc 459
|| ||||| |||| ||||||||||| ||||||||||||||||||||| |||||| ||||
Sbjct: 386 ttcaaattataagaccaggtttcctcacgatgttttccttcaccgtccgtcagtagtgtc 445
Query: 460 taaatattgttagaaagtacatatgact---atgaaaaatcacaatggtacttgccaggt 516
|||||| | ||| ||||| ||||| | | | ||| |||||| | |||||| |||||
Sbjct: 446 taaatactcttaaaaagtgcatatcattcgaaaaaaagatcacattagtacttcccagga 505
Query: 517 ttcgaacccgcgccctcacccatgagaggcggacctttaacctccaggccaccacg 572
|||||||| || |||||| | ||||||||| ||||||||||| |||||||||||
Sbjct: 506 ttcgaacctgcaccctcatgtacgagaggcgggcctttaacctctaggccaccacg 561
>BF01031B1E12
Length = 730
Score = 178 bits (90), Expect = 3e-44
Identities = 155/174 (89%), Gaps = 2/174 (1%)
Strand = Plus / Minus
Query: 282 catcatcatcagcctatcagagcccactgctaagcaaaggcctcttctcacacagagaag 341
||||||||| |||||||| |||||||||||| |||||| || |||||||||| ||||||
Sbjct: 216 catcatcataagcctatcggagcccactgctgagcaaatccc-cttctcacacggagaag 158
Query: 342 gttagagcattcatcaccacgcttgctcaagaagggttggcgatttcaaacttataattt 401
||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| |||
Sbjct: 157 gttagagcattaatcaccacgcttgctcaagacgggttggcgatttcaatcttatacttt 98
Query: 402 g-aaattgtaagtccaggtttccttacgatgttttccttcaccgtctgtcagtg 454
| ||| |||| ||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 97 gctaatcataagaccaggtttcctcacgatgttttccctcaccgtctctcagtg 44
>BF01037B1H08
Length = 758
Score = 168 bits (85), Expect = 3e-41
Identities = 134/149 (89%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 426 acgatgttttccttcaccgtctgtcagtgatgtctaaatattgttagaaagtacatatga 485
||||||||||| |||||||| ||||||| || ||||||||| |||||||||||||||||
Sbjct: 220 acgatgttttcactcaccgtccgtcagtggtgactaaatattcttagaaagtacatatga 161
Query: 486 ctatgaaaa-atcacaatggtacttgccaggtttcgaacccgcgccctcacccatgagag 544
|| ||||| |||||| ||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 160 ctcggaaaagatcacattggtacttgccaggtttcgaacccgcgccttcacgtatgagag 101
Query: 545 gcggacctttaacctccaggccaccacga 573
|||| ||||||||||||||||||| ||||
Sbjct: 100 gcgggcctttaacctccaggccacaacga 72
Score = 137 bits (69), Expect = 1e-31
Identities = 102/113 (90%)
Strand = Plus / Minus
Query: 278 ttatcatcatcatcagcctatcagagcccactgctaagcaaaggcctcttctcacacaga 337
||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||| |
Sbjct: 351 ttatcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgta 292
Query: 338 gaaggttagagcattcatcaccacgcttgctcaagaagggttggcgatttcaa 390
||||||||||||||| | |||||||||||||||||| ||| ||||||||||||
Sbjct: 291 gaaggttagagcattaagcaccacgcttgctcaagacggggtggcgatttcaa 239
>BF01029B2F12
Length = 749
Score = 151 bits (76), Expect = 8e-36
Identities = 142/165 (86%)
Strand = Plus / Plus
Query: 409 taagtccaggtttccttacgatgttttccttcaccgtctgtcagtgatgtctaaatattg 468
|||| ||||||||||| |||||| ||||||||||||| ||||||| |||||||||| |
Sbjct: 546 taagaccaggtttcctcgcgatgtcttccttcaccgtccgtcagtggtgtctaaatactc 605
Query: 469 ttagaaagtacatatgactatgaaaaatcacaatggtacttgccaggtttcgaacccgcg 528
|||||||||||||||| || | | |||||||| |||||||||||||||||||||||||||
Sbjct: 606 ttagaaagtacatatgtctctcataaatcacattggtacttgccaggtttcgaacccgcg 665
Query: 529 ccctcacccatgagaggcggacctttaacctccaggccaccacga 573
|||||| || | || ||| | |||| |||| ||||||||||||
Sbjct: 666 ccctcatacacgnnagncgggcttttagcctctaggccaccacga 710
>BF01010B2F09
Length = 764
Score = 151 bits (76), Expect = 8e-36
Identities = 241/291 (82%), Gaps = 10/291 (3%)
Strand = Plus / Plus
Query: 280 atcatcatcatcagcctatcagagcccactgctaagcaaaggcctcttctcacacagaga 339
|||||||||| |||||| || |||||| | ||| || |||| |||||||||| ||||
Sbjct: 262 atcatcatcaccagcctgtcggagcccgccgctgag---aggcgtcttctcacatggaga 318
Query: 340 aggttagagcattcatcaccacgcttgctcaagaagggttggcgatttcaaacttataat 399
||||||||||||| ||||||||||| |||||||| || |||||||||| || |||||||
Sbjct: 319 aggttagagcattaatcaccacgctcgctcaagacggattggcgattttaattttataat 378
Query: 400 ttgaaattgtaagtccaggtttccttacgatgttttccttcaccgtctgtcagtgatgtc 459
|| | || || |||||||||||| | | || |||||||||||| ||||||| |||
Sbjct: 379 tttta-ttacaaatccaggtttcctca---tattctccttcaccgtccgtcagtggcgtc 434
Query: 460 taaatattgttagaaagtacatatgact--atgaaaaatcacaatggtacttgccaggtt 517
|||||| | ||||||||||||||||||| ||||| | ||||| ||||||||| ||||||
Sbjct: 435 taaatactcttagaaagtacatatgactcgatgaaga-tcacattggtacttgtcaggtt 493
Query: 518 tcgaacccgcgccctcacccatgagaggcggacctttaacctccaggccac 568
||||||||||| | |||| |||||||| | |||||||||||||| ||||
Sbjct: 494 tcgaacccgcgacttcacgtgtgagaggctggcctttaacctccagcccac 544
>BF01040A1G09
Length = 753
Score = 143 bits (72), Expect = 2e-33
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 280 atcatcatcatcagcctatcagagcccactgctaagcaaaggcctcttctcacacagaga 339
|||||||||||||||||||| || |||||||| |||| | |||||||||| || ||||
Sbjct: 137 atcatcatcatcagcctatcggaagccactgctgagcataagcctcttctcgcatggaga 78
Query: 340 aggttagagcattcatcaccacgcttgctcaagaagggttggcgatttcaaacttataat 399
||||| |||||| ||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 77 aggtttaagcattaatcgccacgcttgctcaagatgggttggcgatttcaaacttataat 18
Query: 400 ttgaaatt 407
||||||||
Sbjct: 17 ttgaaatt 10
>BF01062A1A05
Length = 777
Score = 121 bits (61), Expect = 7e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 301 gagcccactgctaagcaaaggcctcttctcacacagagaaggttagagcattcatcacca 360
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 585 gagcccactgctaagcaaaggcctcttctcacaaggagaaggttagagcattaatcacca 526
Query: 361 cgcttgctcaaga 373
|||||||||||||
Sbjct: 525 cgcttgctcaaga 513
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,936
Number of extensions: 6516
Number of successful extensions: 6516
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6506
Number of HSP's successfully gapped: 11
Length of query: 3112
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3094
Effective length of database: 8,109,745
Effective search space: 25091551030
Effective search space used: 25091551030
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)