BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN19475 (UTR included)
         (1828 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01058A1C03                                                           76   2e-13
BF01042A2B06                                                           70   1e-11
BF01022A1G02                                                           70   1e-11
BF01049B2H03                                                           68   5e-11

>BF01058A1C03
          Length = 779

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 443 tcgcgagtattcatttaaatgaaactaatatttacggattac 484
           ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 522 tcgcgagtattcatttaaatgaaactaatattttcggattac 481


>BF01042A2B06
          Length = 781

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 68/78 (87%), Gaps = 2/78 (2%)
 Strand = Plus / Minus

                                                                       
Query: 427 taatgagatctaagact--cgcgagtattcatttaaatgaaactaatatttacggattac 484
           |||||||||| ||||||  ||||||||||| ||||||| ||| |||||||| ||||||||
Sbjct: 373 taatgagatcaaagactttcgcgagtattcgtttaaattaaagtaatattttcggattac 314

                             
Query: 485 tatgcgtttttttattat 502
           || ||||| ||| |||||
Sbjct: 313 tacgcgttatttaattat 296


>BF01022A1G02
          Length = 638

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/70 (88%), Gaps = 2/70 (2%)
 Strand = Plus / Plus

                                                                       
Query: 427 taatgagatctaagactcgcg--agtattcatttaaatgaaactaatatttacggattac 484
           ||||||||| ||||||| |||  ||| |||||||||||||| ||||||||| ||||||||
Sbjct: 499 taatgagatttaagacttgcgggagtgttcatttaaatgaagctaatattttcggattac 558

                     
Query: 485 tatgcgtttt 494
           || |||||||
Sbjct: 559 tacgcgtttt 568


>BF01049B2H03
          Length = 832

 Score = 67.9 bits (34), Expect = 5e-11
 Identities = 65/73 (89%), Gaps = 3/73 (4%)
 Strand = Plus / Minus

                                                                       
Query: 427 taatgagatctaagactc--gcgagtattcatttaaatgaaactaata-tttacggatta 483
           ||||||||||||||| |   |||||||||||||||||||||||||||| ||| |||||||
Sbjct: 354 taatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcggatta 295

                        
Query: 484 ctatgcgtttttt 496
           ||| |||| ||||
Sbjct: 294 ctaagcgtatttt 282


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,648
Number of extensions: 5810
Number of successful extensions: 5810
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5809
Number of HSP's successfully gapped: 4
Length of query: 1828
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1811
Effective length of database: 8,119,229
Effective search space: 14703923719
Effective search space used: 14703923719
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)