BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19481 (UTR included)
(5980 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2688_C1 2093 0.0
BF01039B2H08 1275 0.0
BF14_540_C1 450 e-125
>BF14_2688_C1
Length = 1072
Score = 2093 bits (1056), Expect = 0.0
Identities = 1068/1072 (99%)
Strand = Plus / Plus
Query: 4222 tactaggattcgctgcttgtttaagacacggtctgatacctaatttattggacggaggcc 4281
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 tactaggattcgctgcttgtttaagacacggtctgatacctaatttattggacggaggtc 60
Query: 4282 gcaacgctagattcaactgtcgcgatgcggtgtggtggtggctgcagagcatcaaacagt 4341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaacgctagattcaactgtcgcgatgcggtgtggtggtggctgcagagcatcaaacagt 120
Query: 4342 actgcacggaggcccctcaaggctactctatcctgacggacccggtgtctcgtatattcc 4401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actgcacggaggcccctcaaggctactctatcctgacggacccggtgtctcgtatattcc 180
Query: 4402 cgaaagacgacagtgagcctgcacccccaggggctgcggaccaaccgctgcatgacgtta 4461
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaagacgacagtgagcctgcacccccaggggctgcggaccaaccgctgcatgacgtta 240
Query: 4462 tgcaggaagccttggacgttcactttcagggtctcgtctttcgtgagcgcaacgccggcc 4521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcaggaagccttggacgttcactttcagggtctcgtctttcgtgagcgcaacgccggcc 300
Query: 4522 gacagatagacgcacacatgtccgacaagggtttcaacatccagatcggcgtggaccccg 4581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacagatagacgcacacatgtccgacaagggtttcaacatccagatcggcgtggaccccg 360
Query: 4582 agaccgggttcccgttcggaggaaacgaagccaactgcgggacgtggatggataagatgg 4641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaccgggttcccgttcggaggaaacgaagccaactgcgggacgtggatggataagatgg 420
Query: 4642 gttcgtcggagacggccggcacgcgggggaagcccgccacgccgcgcgacggcagcgcgg 4701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttcgtcggagacggccggcacgcgggggaagcccgccacgccgcgcgacggcagcgcgg 480
Query: 4702 tggagctcgtcgcgatggcgtactgcgtcgcgtcctggctggcggcacagcatcgctccg 4761
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggagctcgtcgcgatggcgtacagcgtcgcgtcctggctggcggcacagcatcgctccg 540
Query: 4762 ctaagtatccgtacccgggcgtggcgaggcggcaccgagacggatccctcaccgcctgga 4821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctaagtatccgtacccgggcgtggcgaggcggcaccgagacggatccctcaccgcctgga 600
Query: 4822 cgtactcccagtgggcggatcgaatacgacgctccttcgaacgacacttctgggtcccgg 4881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgtactcccagtgggcggatcgaatacgacgctccttcgaacgacacttctgggtcccgg 660
Query: 4882 ccgcgccctcggccgccgaccagcgcccagacctcgtgcaccgccgcgccatctacaagg 4941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgcgccctcggccgccgaccagcgcccagacctcgtgcaccgccgcgccatctacaagg 720
Query: 4942 acacgcacggcgcctcgcagccctgggccgactatcaactgcgctgcaactacgtcgtcg 5001
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 721 acacgcacggcgcctcgcagccctgggccgactaccaactgcgctgcaactacgtcgtcg 780
Query: 5002 ccatggctctggcgccggaattgttcgacccgcgacacgcctggctcgccctggacaatg 5061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccatggctctggcgccggaattgttcgacccgcgacacgcctggctcgccctggacaatg 840
Query: 5062 tcgagaaactgctggtcgggcctctcggtctcaaaaccctcgaccccgaggactgggcct 5121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tcgagaaactgctggtcgggcctctcggtctcaaaaccctcgaccccgaggactgggcct 900
Query: 5122 accgtcccaactacgacaactcggacaacagctcggacccgagcgttgcacacggcttca 5181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 accgtcccaactacgacaactcggacaacagctcggacccgagcgttgcacacggcttca 960
Query: 5182 actaccaccagggcccggagtggacgtggccgctcggcttctacctcagagcgcggctcg 5241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 actaccaccagggcccggagtggacgtggccgctcggcttctacctcagagcgcggctcg 1020
Query: 5242 ccttcgctcacgacaacggtcagttctccaagaccgtggcggcggcatacgc 5293
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccttcgctcacgacaacggtcagttctccaagaccgtggcggcggcatacgc 1072
>BF01039B2H08
Length = 694
Score = 1275 bits (643), Expect = 0.0
Identities = 680/694 (97%)
Strand = Plus / Plus
Query: 3004 ttatagcagctaggcgggcgctcaacgatctacatttacatctagcagcctccggatact 3063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatagcagctaggcgggcgctcaacgatctacatttacatctagcagcctccggatact 60
Query: 3064 cggaggtgtacgtcgatcaaatggatgctgacgtggtggctgtgacgagacacgaaccac 3123
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 cggaggtgtacgtcgatcaaatggatgctgacgtggtggctgtgacgagacacgagccac 120
Query: 3124 attcgagaaagtctgttattttggtcgccttcaccgccttcaaggcccccgacgagtctt 3183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attcgagaaagtctgttattttggtcgccttcaccgccttcaaggcccccgacgagtctt 180
Query: 3184 ccaccggccgctacgtgaagccgttacggttcgagggacaactggaggaaattattttgg 3243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaccggccgctacgtgaagccgttacggttcgagggacaactggaggaaattattttgg 240
Query: 3244 aggcggtgctgagacacaaggaccacagaagcacgggtcgcccgttccagacgtgcggag 3303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggcggtgctgagacacaaggaccacagaagcacgggtcgcccgttccagacgtgcggag 300
Query: 3304 ggttctctcgtcacccgcagcacatcaacggtctcagcgactacgaggccagcgtccgct 3363
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 301 ggttctctcgtcacccgcagcacgtcaacggtctcagtgactacgaggccagcgtccgct 360
Query: 3364 gcggcgttccgttggcgcagtccaacgtgtttgttagtgaacgccgtgacggtccctata 3423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcggcgttccgttggcgcagtccaacgtgtttgttagtgaacgccgtgacggtccctata 420
Query: 3424 ctgtgctggagttcggcgtgctaccccccgggacggtggtcgcggtgcgtgtggctccac 3483
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 421 ctgtgctggagttcggcgtgctaccccccgggacggtggtcgcggtgcgtgtggccccac 480
Query: 3484 attcctcgcaagcgggagcgttggcggctctcagacgagtgacctgccagcatccagcca 3543
|||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 attcctcgcaagtgggggcgctggcggctctcagacgagtgacctgccagcatccagcga 540
Query: 3544 cagatcccctgggtctatcgccggcactcactgacctcgatctaggagatttcaacgcgt 3603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagatcccctgggtctatcgccggcactcactgacctcgatctaggagatttcaacgcgc 600
Query: 3604 tgctatattgctgtgacgcggaggaacgtgagcgctgtgggggcggagtgtacgacgtgc 3663
||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 601 tgctatattgctgtgacgcggnnnaacgtgagcgctgtgggggcggnntgtacgacgtgc 660
Query: 3664 ccggtcacggtccgctcgtatacgctgggctgca 3697
||||||||||||||||||||||||||||||||||
Sbjct: 661 ccggtcacggtccgctcgtatacgctgggctgca 694
>BF14_540_C1
Length = 1202
Score = 450 bits (227), Expect = e-125
Identities = 234/235 (99%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 5746 tatcgctccacaccggcccgccccagtcctccggccccactgttcactacactccactgc 5805
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatcgctcc-caccggcccgccccagtcctccggccccactgttcactacactccactgc 59
Query: 5806 ccagtgtcccgagtgacctcgtcccgggcggcggtgtgctggtcgatgtcggagtgcctg 5865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ccagtgtcccgagtgacctcgtcccgggcggcggtgtgctggtcgatgtcggagtgcctg 119
Query: 5866 ctcctcgtcggaaggtccgttacgggtctattcgtcgtggtcgtagggacgtgcctcgcg 5925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctcctcgtcggaaggtccgttacgggtctattcgtcgtggtcgtagggacgtgcctcgcg 179
Query: 5926 tgttcgggtctcctctagactcccagagcctgtatcccgcccgtcaccttcctct 5980
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgttcgggtctcctctagactcccagagcctgtatcccgcccgtcaccttcctct 234
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 382,625
Number of extensions: 5764
Number of successful extensions: 5764
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5764
Number of HSP's successfully gapped: 3
Length of query: 5980
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5962
Effective length of database: 8,109,745
Effective search space: 48350299690
Effective search space used: 48350299690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)