BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19502 (UTR included)
(1545 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_299_C1 1725 0.0
>BF14_299_C1
Length = 1024
Score = 1725 bits (870), Expect = 0.0
Identities = 894/902 (99%)
Strand = Plus / Plus
Query: 98 gaggttcttcttcgtatggactgtgtgggcatttgcggctccgacgtccactactggcag 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaggttcttcttcgtatggactgtgtgggcatttgcggctccgacgtccactactggcag 182
Query: 158 ggcggcagctgtggacattttgtattgaaggatcctatgattatgggacacgaggcctct 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggcggcagctgtggacattttgtattgaaggatcctatgattatgggacacgaggcctct 242
Query: 218 ggcgtcgtcgcgaaggtggggggaaacgttaaaaatctgtgtgtgggcgatcgtgtggct 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggcgtcgtcgcgaaggtggggggaaacgttaaaaatctgtgtgtgggcgatcgtgtggct 302
Query: 278 attgaaccgggtgttccgtgccgctactgcgagttctgtaagactggacggtaccacctc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 attgaaccgggtgttccgtgccgctactgcgagttctgtaagactggacggtaccacctc 362
Query: 338 tgccctgacatacagttctgcgccacgcctcccgtccacggaaacctctccagatactac 397
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgtcctgacatacagttctgcgccacgcctcccgtccacggaaacctctccagatactac 422
Query: 398 aaacacgccgcggacttttgttacaaattgccagatcatgtctctatggaggaaggtgct 457
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaacacgccgcggacttctgttacaaattgccagatcatgtctctatggaggaaggtgct 482
Query: 458 ttgttggaacctctatcagtgggaatccacgcgtgtcgtcgcggaggcgtcacagctggg 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttgttggaacctctatcagtgggaatccacgcgtgtcgtcgcggaggcgtcacagctggg 542
Query: 518 gacttcgtgctgatactaggagctggtcccataggcctcgtcacactcctcgcagccagg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gacttcgtgctgatactaggagctggtcccataggcctcgtcacactcctcgcagccagg 602
Query: 578 gccatgggcgccagcaagatcgtgatcacagacatcttggagtctcggctggagacagcc 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gccatgggcgccagcaagatcgtgatcacagacatcttggagtctcggctggagacagcc 662
Query: 638 cgtgcgttgggcgcggatcatacgttgttggtgtctcgtgactccaacgaggcggacctg 697
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cgtgagttgggcgcggatcatacgttgttggtgtctcgtgactccaacgaggcggacctg 722
Query: 698 gtccgagcactccacgacctcctgggggcgcaccccgatgtgtccgtggacgccagcgga 757
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gtccgagcgctccacgacctcctgggggcgcaccccgatgtgtccgtggacgccagcgga 782
Query: 758 gcgcccgctaccgtgcgactcgcgctactggccactaagtcagggggttgtgctgtcctg 817
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gcgcccgccaccgtgcgactcgcgctactggccactaagtcagggggttgtgctgtcctg 842
Query: 818 gtcggtatgggcagccctgaggtcaccctgcctctggccggggccatggcgcgagaggtc 877
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 843 gtcggtatgggtagccctgaggtcaccctgcctctggccggggccatggcgcgagaagtc 902
Query: 878 gacatcagaggcatcttcagatacgtcaacgaataccccatcgctctatcgctggtgtcg 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 gacatcagaggcatcttcagatacgtcaacgaataccccatcgctctatcgctggtgtcg 962
Query: 938 agcggtcagatcaacctgaagccgctggtgacgcaccacttctcactggaggagaccttg 997
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 agtggtcagatcaacctgaagccgctggtgacgcaccacttctcactggaggagaccttg 1022
Query: 998 ga 999
||
Sbjct: 1023 ga 1024
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 156,297
Number of extensions: 3320
Number of successful extensions: 3320
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3320
Number of HSP's successfully gapped: 1
Length of query: 1545
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1528
Effective length of database: 8,119,229
Effective search space: 12406181912
Effective search space used: 12406181912
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)