BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19509 (UTR included)
(1645 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_410_C1 1314 0.0
>BF14_410_C1
Length = 760
Score = 1314 bits (663), Expect = 0.0
Identities = 705/718 (98%), Gaps = 3/718 (0%)
Strand = Plus / Plus
Query: 432 tatatatttttttaaattcgtcacgtttagaaccgaagtgg-aaagagatcgctgtgaaa 490
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1 tatatatttttttaaattcgtcacgtttagnnncgaagtggcaaagagatcgctgtgaaa 60
Query: 491 gcgattaataatggc--aaaagttcatataaccaacgtagtagtgttagacaatccgagt 548
|||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gcgattaataatngcgcaaaagttcacataaccaacgtagtagtgttagacaatccgagt 120
Query: 549 ccttttctcaatcctttccaattcgagttaacctttgaatgcatcgaagaattgaaggag 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccttttctcaatcctttccaattcgagttaacctttgaatgcatcgaagaattgaaggag 180
Query: 609 gatctcgaatggaagatgatatatgtcggatcagcggaaactgaagagcacgaccaagtg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatctcgaatggaagatgatatatgtcggatcagcggaaactgaagagcacgaccaagtg 240
Query: 669 ctggacacaatatacgttggaccaataccagaaggaaggcatatgtttgtgttccaagcg 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggacacaatatacgttggaccaataccagaaggaaggcatatgtttgtgttccaagcg 300
Query: 729 ccgccgccagacgtgaatagaataccggaaaacgatgcgctcggggttacggtcgttcta 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgccgccagacgtgaatagaataccggaaaacgatgcgctcggggttacggtcgttcta 360
Query: 789 ctaacatgctcctaccgcgggcaggagttcgttagagttggatatttcatcaacaacgaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctaacatgctcctaccgcgggcaggagttcgttagagttggatatttcatcaacaacgaa 420
Query: 849 tacagtgacagcgagcccgaattacgcgagaatccgccagccaagccccagtttgacaag 908
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacagtgacagcgagcccgaattacgcgagaatccgccagccaagccccagtttgacaaa 480
Query: 909 gttgtgagaaatatcctcgcatctgaaccaagagtgactagatttaagattaattgggct 968
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 gttgtgagaaatatcctcgcatctgaaccgagagtgactagatttaagattaattgggct 540
Query: 969 gaacccgactcggcggctgccgtcgactctggcgatggtaatttagaaactagtcacgcg 1028
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaacccgactcggcggctgccgttgactctggcgatggtaatttagaaactagtcacgcg 600
Query: 1029 cccagcaacgactcgtacgccttcaacgctgacagccaaatcagtgggatggaattccaa 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cccagcaacgactcgtacgccttcaacgctgacagccaaatcagtgggatggaattccaa 660
Query: 1089 ggcagcttcagcggttacggtgacaactcgaattcaatagctccaatggaatgctaag 1146
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 661 ggcagcttcagcggttacggcgacaactcgaattcaatagcaccaatggaatgctaag 718
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1318 agattaaataatatggagtagttaaaattatgtcataatgtgaa 1361
|||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 717 agattaaataatatggagtagttaaaattatgacataatgtgaa 760
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,281
Number of extensions: 12220
Number of successful extensions: 12220
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12218
Number of HSP's successfully gapped: 2
Length of query: 1645
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1628
Effective length of database: 8,119,229
Effective search space: 13218104812
Effective search space used: 13218104812
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)