BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19526 (UTR included)
(3658 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B1D11 1154 0.0
BF01045A2G06 383 e-105
BF01015A2C05 337 7e-92
BF01056B2G05 276 2e-73
BF01021A2B11 270 1e-71
BF01034A2B12 222 3e-57
BF01012B1D03 204 7e-52
>BF01057B1D11
Length = 870
Score = 1154 bits (582), Expect = 0.0
Identities = 600/606 (99%)
Strand = Plus / Plus
Query: 389 gttaggtagcacttcgcagactgtagctagtgtactatagttaaagattcgtcgtaaaca 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttaggtagcacttcgcagactgtagctagtgtactatagttaaagattcgtcgtaaaca 60
Query: 449 aataaaataacgaaaataaacctaatgtggtgaggtaaacggtaatataaatatggagct 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aataaaataacgaaaataaacctaatgtggtgaggtaaacggtaatataaatatggagct 120
Query: 509 catttattctatgagacgtaagccccttaaatgtgagcccccacattttaatagcacaga 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catttattctatgagacgtaagccccttaaatgtgagcccccacattttaatagcacaga 180
Query: 569 cccagaagtagtgcggccaatatgcaccatatcaatacgcaacatcatagcgttctcatc 628
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 181 cccagaagtagtgcggccaatatgcactatatcaatacgcaacatcatagcattctcatc 240
Query: 629 acttacggaactgtccgacactgatggtgacacctggggtggtcatgtgtatgtttgtga 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttacggaactgtccgacactgatggtgacacctggggtggtcatgtgtatgtttgtga 300
Query: 689 tattgacacaccctgggacgcacacaaagtcaccagcaccgtacatcctgtttcagctct 748
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tattgacacaccttgggacgcacacaaagtcaccagcaccgtacatcctgtttcagctct 360
Query: 749 agaatgggacggtgaaggcaagcagctcctggtcgcgactaccgtcggtgacgtgtctgt 808
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361 agaatgggacggtgaaggcaagcagcttctggtcgcgactaccgtcggtgacgtgtctgt 420
Query: 809 gtttggacagaaagactacctccttaatgagtggacttgtttatatacagctaattttcc 868
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 gtttggacagaaagactacctccttaatgagtggacttgtttatatacagcaaattttcc 480
Query: 869 aggagagcacatcatccaagccacattcttccacaatggccgcagagtggtcactgtgga 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggagagcacatcatccaagccacattcttccacaatggccgcagagtggtcactgtgga 540
Query: 929 taagaaaccagatgtccctatatatgaacgaatgcagttgttgaggtctacacctacttt 988
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taagaaaccagatgtccccatatatgaacgaatgcagttgttgaggtctacacctacttt 600
Query: 989 gaaagg 994
||||||
Sbjct: 601 gaaagg 606
Score = 470 bits (237), Expect = e-132
Identities = 247/251 (98%)
Strand = Plus / Plus
Query: 1059 ggcgtgtggtgcgcgggcgcgtgcgtggtgtctggttcagggctggtgggggcgctgacg 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggcgtgtggtgcgcgggcgcgtgcgtggtgtctggttcagggctggtgggggcgctgacg 673
Query: 1119 gcgggggagggaggccgggctctcgtcgccacggactgtatgaggcccgcccgggaccac 1178
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcgggggagggaggccgggcgctcgtcgccacggactgtatgaggcccgcccgggaccac 733
Query: 1179 ctctcatcggcgtccatcacacacaagaccggcagtatgttgatcgctgcatgtttccgt 1238
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 734 ctctcatcggcgtccatcacacacaagaccggcagtatgttgatcgctgcgtgtttccgt 793
Query: 1239 cgtggctgtaagcgcgcagtccgcgtcgcccgctgtacggtgtccaggccgagctcgtcc 1298
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 794 cgtggctgtaagcgcgcagtccgcgtcgcccgctgtacggtgtccaggccgnnctcgtcc 853
Query: 1299 aaatgcgctcc 1309
|||||||||||
Sbjct: 854 aaatgcgctcc 864
>BF01045A2G06
Length = 753
Score = 383 bits (193), Expect = e-105
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 3098 agccaccacaggagtgctagcggcgaggtgcagcgcggccggacatcttgttatcatgta 3157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccaccacaggagtgctagcggcgaggtgcagcgcggccggacatcttgttatcatgta 620
Query: 3158 atgatgcaatatagaatttttctttcttttacctttttttttttgaaacatagtaaatga 3217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgatgcaatatagaatttttctttcttttacctttttttttttgaaacatagtaaatga 680
Query: 3218 agatatgatatgtgcgtaacggcgtggacgaaagtatgtgtattttgtaacactctggtt 3277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agatatgatatgtgcgtaacggcgtggacgaaagtatgtgtattttgtaacactctggtt 740
Query: 3278 ggattgctataca 3290
|||||||||||||
Sbjct: 741 ggattgctataca 753
>BF01015A2C05
Length = 688
Score = 337 bits (170), Expect = 7e-92
Identities = 176/179 (98%)
Strand = Plus / Plus
Query: 2976 cgtttggtccgtgactacgttcttgtaattaatcgcgatttcctcaaatattattgcaac 3035
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2 cgtttggtccgtgactacgttcttgtaattaatcnnnatttcctcaaatattattgcaac 61
Query: 3036 gcacctgttgttcttaaaatttcaatagttaattcgtgtaattatattatggcagacaaa 3095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gcacctgttgttcttaaaatttcaatagttaattcgtgtaattatattatggcagacaaa 121
Query: 3096 aaagccaccacaggagtgctagcggcgaggtgcagcgcggccggacatcttgttatcat 3154
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaagccaccacaggagtgctagcggcgaggtgcagcgcggccggacatcttgttatcat 180
>BF01056B2G05
Length = 846
Score = 276 bits (139), Expect = 2e-73
Identities = 162/171 (94%), Gaps = 9/171 (5%)
Strand = Plus / Plus
Query: 2993 cgttcttgtaattaatcgcgatttcctcaaatattattgcaacgcacctgttgttcttaa 3052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgttcttgtaattaatcgcgatttcctcaaatattattgcaacgcacctgttgttcttaa 60
Query: 3053 aatttcaatagttaattcgtgtaattatattatggcagacaaaaa---------agccac 3103
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 aatttcaatagttaattcgtgtaattatattatggcagacaaaaaaggcccctcagccac 120
Query: 3104 cacaggagtgctagcggcgaggtgcagcgcggccggacatcttgttatcat 3154
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacaggagtgctagcggcgaggtgcagcgcggccggacatcttgttatcat 171
>BF01021A2B11
Length = 729
Score = 270 bits (136), Expect = 1e-71
Identities = 142/144 (98%)
Strand = Plus / Minus
Query: 2801 caggtacatgtacctgggcgggcgcggtcgcgccgctcgctggcggcagtgcggtcgctg 2860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caggtacatgtacctgggcgggcgcggtcgcgccgctcgctggcggcagtgcggtcgctg 606
Query: 2861 cggggcgcgcgcccttccggagccccgtgccgcgcctcacgccctgcagagggcttatga 2920
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 605 cggggcgcgcgcccttccggagccccgagccgcgcctcacgccctgcagagggcttacga 546
Query: 2921 tggaagatatctagcacactgcag 2944
||||||||||||||||||||||||
Sbjct: 545 tggaagatatctagcacactgcag 522
>BF01034A2B12
Length = 809
Score = 222 bits (112), Expect = 3e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 2988 gactacgttcttgtaattaatcgcgatttcctcaaatattattgcaacgcacctgttgtt 3047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gactacgttcttgtaattaatcgcgatttcctcaaatattattgcaacgcacctgttgtt 71
Query: 3048 cttaaaatttcaatagttaattcgtgtaattatattatggcagacaaaaaag 3099
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cttaaaatttcaatagttaattcgtgtaattatattatggcagacaaaaaag 123
>BF01012B1D03
Length = 819
Score = 204 bits (103), Expect = 7e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 2997 cttgtaattaatcgcgatttcctcaaatattattgcaacgcacctgttgttcttaaaatt 3056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgtaattaatcgcgatttcctcaaatattattgcaacgcacctgttgttcttaaaatt 60
Query: 3057 tcaatagttaattcgtgtaattatattatggcagacaaaaaag 3099
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaatagttaattcgtgtaattatattatggcagacaaaaaag 103
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 412,412
Number of extensions: 22366
Number of successful extensions: 22366
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 22366
Number of HSP's successfully gapped: 9
Length of query: 3658
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3640
Effective length of database: 8,109,745
Effective search space: 29519471800
Effective search space used: 29519471800
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)