BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19546 (UTR included)
(2352 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 1980 0.0
BF01049A2D11 202 2e-51
BF14_729_C1 194 4e-49
>BF14_729_C3
Length = 2041
Score = 1980 bits (999), Expect = 0.0
Identities = 1043/1059 (98%)
Strand = Plus / Plus
Query: 698 ggtttcccccgttgtcgctgacatattcatggaggacttcgaggtgcgagccctttgctc 757
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggtttcccccgttgtcgctgaaatattcatggaggacttcgaggtgcgagccctttgctc 547
Query: 758 tcctcctataagacctttaatttataaacggtatgtagatgacaccttcacaatattaaa 817
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 548 tcctcctataagacctttaatttttaaacggtatgtagatgacacctttacaatattaaa 607
Query: 818 taaaaataaaacatctgcttttctgaaccatctcaattctatcaatagtaagattcagtg 877
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 608 taaaaataaaacatctgcttttctgaaccatctcaattctatcaataataagattcagtt 667
Query: 878 tactatagaattggaggcaaataattctttagctttccttgatatacttgttgttaggaa 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tactatagaattggaggcaaataattctttagctttccttgatatacttgttgttaggaa 727
Query: 938 tcctgacaatactttgggacatactgtttataggaaacccacacatacggacaggtacct 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tcctgacaatactttgggacatactgtttataggaaacccacacatacggacaggtacct 787
Query: 998 caatggttactcacaccaccaccctatccagttagctaccgttggcaaatctttgttaca 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 caatggttactcacaccaccaccctatccagttagctaccgttggcaaatctttgttaca 847
Query: 1058 gagagcccaacatctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaaca 1117
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gagagcccaacacctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaaca 907
Query: 1118 tgctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaagcacctgaagcc 1177
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 908 tgctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaaccacctgaagcc 967
Query: 1178 acccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaat 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 acccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaat 1027
Query: 1238 aggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgag 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 aggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgag 1087
Query: 1298 ccaattcttgagaccaatcaagagtaacattcctttacaacaagcgggtgtatacaaact 1357
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 ccaattcttgagaccaatcaaaagtaacattcctttacaacaagcgggtgtatacaaact 1147
Query: 1358 cgactgtgactgtgtcttgtcatacattggacagacgaagaggagcatcggtacaagggt 1417
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1148 cgactgtgactgtggcttgtcatacattggacagacgaagaggagcatcggtacaagagt 1207
Query: 1418 taaggaacacatctcagatatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaaca 1477
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 taaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaaca 1267
Query: 1478 cacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcggga 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 cacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcggga 1327
Query: 1538 agacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaattt 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 agacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaattt 1387
Query: 1598 caatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaa 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 caatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaa 1447
Query: 1658 atcccatgtccgtaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggca 1717
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 atcccatgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggca 1507
Query: 1718 tccagagcggtacgccagaaaattaagaaatcgatggcg 1756
||||||||||||||||| ||||||||||||||||||
Sbjct: 1508 tccagagcggtacgccannnnattaagaaatcgatggcg 1546
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 762 cctataagacctttaatttataaacggtatgtagatgacaccttcacaatat 813
||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 489 cctataagacctttaatatataaacggtatgtagttgacaccttcacaatat 438
>BF01049A2D11
Length = 776
Score = 202 bits (102), Expect = 2e-51
Identities = 148/162 (91%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 1374 ttgtcatacattggacagacgaagaggagcatcggtacaagggttaaggaacacatctca 1433
|||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 1434 gatatcaa-aaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaacc 1492
|| |||| ||| ||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 1493 aggccactacattcgttttgataaacctcaaatcctcgctcg 1534
||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF14_729_C1
Length = 981
Score = 194 bits (98), Expect = 4e-49
Identities = 132/142 (92%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 1219 agggagttactgacagaataggcaacatcttgaagaaggtttccattaaaactatttaca 1278
|||||||||||||||||||||||||||| ||||||||| ||||||| || |||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 1279 aaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcctttacaac 1338
|||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 1339 aagcgggtgtatacaaactcga 1360
||||||||||||||||||||||
Sbjct: 23 aagcgggtgtatacaaactcga 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,151
Number of extensions: 4796
Number of successful extensions: 4796
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4795
Number of HSP's successfully gapped: 5
Length of query: 2352
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2335
Effective length of database: 8,119,229
Effective search space: 18958399715
Effective search space used: 18958399715
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)