BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19570 (UTR included)
(2491 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A2D05 1342 0.0
>BF01040A2D05
Length = 701
Score = 1342 bits (677), Expect = 0.0
Identities = 695/701 (99%)
Strand = Plus / Plus
Query: 753 ttcggttctatatgtacacaattcaacacaacatatcagggagatgaagattgtctgttt 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcggttctatatgtacacaattcaacacaacatatcagggagatgaagattgtctgttt 60
Query: 813 ctgaacgtctacacgaaggttttggataaaaattccaaaattcccgtcatggtatacatt 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaacgtctacacgaaggttttggataaaaattccaaaattcccgtcatggtatacatt 120
Query: 873 tatgggggctcctactacgagggatcaggagatttctttttgggagatttccttatgcag 932
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 tatgggggctcctactacgagggatcaggagatttctttttgggagacttccttatgcag 180
Query: 933 catgatgttatattagttactttcaattatagactcgaattactcggttttctatcttta 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catgatgttatattagttactttcaattatagactcgaattactcggttttctatcttta 240
Query: 993 ggaataccggaggtacctggaaatgcgggcttgaaagaccaggtcgccgcgttacgttgg 1052
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaataccggaggcacctggaaatgcgggcttgaaagaccaggtcgccgcgttacgttgg 300
Query: 1053 atacagaaaaatatagatcagtttggaggtgatccgagaagtgtaactatttttggggaa 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 301 atacagaaaaatatagatcagtttggaggtgatccgagaagtgtaactattttcggggaa 360
Query: 1113 agttctggggcgtcatcggttacatatcatatgttttcgccgatgtcacgagggcttttc 1172
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agttctggagcgtcatcggttacatatcatatgttttcgccgatgtcacgagggcttttc 420
Query: 1173 cataaagtcatagcacaaagtggtacgtgtattcacgactgggctatcgctaaaggtgcc 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cataaagtcatagcacaaagtggtacgtgtattcacgactgggctatcgctaaaggtgcc 480
Query: 1233 gaggcgagagcttttagagctggaaaaattcgtggaaaagagacagaaaatgttcatgag 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaggcgagagcttttagagctggaaaaattcgtggaaaagagacagaaaatgttcatgag 540
Query: 1293 ctctataactttttcatggatatagatcagtaccaacttactaaccttacattttctact 1352
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctctataaatttttcatggatatagatcagtaccaacttactaaccttacattttctact 600
Query: 1353 ctcacagacgatgagagatatagaggtttgcctgaacaatttatacctgttattgaaaag 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcacagacgatgagagatatagaggtttgcctgaacaatttatacctgttattgaaaag 660
Query: 1413 aaatttcacaatgtagaaccttttattacggaaaacccagt 1453
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 aaatttcacaatgtagaaccttttataacggaaaacccagt 701
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 332,382
Number of extensions: 11524
Number of successful extensions: 11524
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11522
Number of HSP's successfully gapped: 1
Length of query: 2491
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2474
Effective length of database: 8,119,229
Effective search space: 20086972546
Effective search space used: 20086972546
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)