BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19578 (UTR included)
(5308 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1C05 1352 0.0
>BF01005B1C05
Length = 722
Score = 1352 bits (682), Expect = 0.0
Identities = 712/722 (98%)
Strand = Plus / Plus
Query: 4321 aactcaacgacgagggcttcgaggagacgcagagtctgaactcggagagcgcctcgcagg 4380
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 aactcaacgacgagggcttcgaggagacgcttagtctgaactcggagagcgcctcgcagg 60
Query: 4381 gagcgtcctcgggctgcggggtcgactgcgagtcacccgttcccaagaaaaacacagaaa 4440
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 gagcgtcctcgggctgcggcgtcgactgcgactcacccgttcccaagaaaaacacagaaa 120
Query: 4441 tcccaaagaaaatagctaccaaagacacgaggccgcctccgcggacgccgctcgacccca 4500
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 tcccaaagaaaatagctaccaaagacacgaggccgcctccgcggatgccgctcgacccca 180
Query: 4501 ggcgaagtctcccgcggaggccgacctctctgcgggtagagcgctccgcgtccagggcgt 4560
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 ggcgaagtctcccgcggaggccgacctctctgcgggtggagcgctccgcgtccagggcgt 240
Query: 4561 ctctgaggagctcccggagttccttgaacagctcggcgtccgtggcgaccgtcaagcgag 4620
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 ctctgaggagctcccggagttccttgaacagctcagcgtccgtggcgaccgtcaagcgag 300
Query: 4621 cgcccaccatcaaacccgtccccaagccgatccccaaaccggcgcccagggtaccggcct 4680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgcccaccatcaaacccgtccccaagccgatccccaaaccggcgcccagggtaccggcct 360
Query: 4681 cccggtcctcgtccagcggcagctccatcggcacctccaggcccaaggccgacaagacgt 4740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccggtcctcgtccagcggcagctccatcggcacctccaggcccaaggccgacaagacgt 420
Query: 4741 ccggcttcatgaggcccacgcaggcctccaaggtccgagggtccgcggcgaagacgagcg 4800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccggcttcatgaggcccacgcaggcctccaaggtccgagggtccgcggcgaagacgagcg 480
Query: 4801 ccaagtgaactggtggttttcgatctgttggaaccttcaggcgccgcgcggaccgaggcc 4860
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaagtgaactggtggatgtcgatctgttggaaccttcaggcgccgcgcggaccgaggcc 540
Query: 4861 gaagctttcgatgactgagctttatgataagtcttaccgtagatctgtcggcattaacgt 4920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaagctttcgatgactgagctttatgataagtcttaccgtagatctgtcggcattaacgt 600
Query: 4921 aaagtgaatatatatatcgcgcgccgcccgcccgccctacggacggcgcgcttttatttg 4980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaagtgaatatatatatcgcgcgccgcccgcccgccctacggacggcgcgcttttatttg 660
Query: 4981 taaagaggattccggtatctctcacacgcatgttacgggtacggggcggcgtgcgctgtg 5040
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taaagaggattccggtatctcacacacgcatgttacgggtacggggcggcgtgcgctgtg 720
Query: 5041 at 5042
||
Sbjct: 721 at 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 420,020
Number of extensions: 8046
Number of successful extensions: 8046
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8046
Number of HSP's successfully gapped: 1
Length of query: 5308
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5290
Effective length of database: 8,109,745
Effective search space: 42900551050
Effective search space used: 42900551050
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)