BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19604 (UTR included)
(1369 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3286_C1 402 e-112
BF14_729_C3 343 5e-94
BF01031B2E06 84 7e-16
BF14_335_C2 82 3e-15
>BF14_3286_C1
Length = 1208
Score = 402 bits (203), Expect = e-112
Identities = 209/211 (99%)
Strand = Plus / Minus
Query: 1159 ctccaatttatccaactgtatcctcagtatgttattgtcagccaacagcgaatcaatctt 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ctccaatttatccaactgtatcctcagtatgttattgtcagccaacagcgaatcaatctt 841
Query: 1219 tccttgcttctgtatcaatgtctgtgtcaagtaatgtattttttcgctgtcaatatccct 1278
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 840 tccttgcttctgtatcaatgtctgtgtcaggtaatgtattttttcgctgtcaatatccct 781
Query: 1279 gatgacgtcatagtccgctacgttcaaggcactcgtgtcgcttgtacgtatagacgacgc 1338
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 780 gatgacgtcatagtccgctacgttcaaggcactcgtgtcgcttgtacgtacagacgacgc 721
Query: 1339 cgtttctcgtagatgtatcaattcgttttcc 1369
|||||||||||||||||||||||||||||||
Sbjct: 720 cgtttctcgtagatgtatcaattcgttttcc 690
Score = 242 bits (122), Expect = 1e-63
Identities = 125/126 (99%)
Strand = Plus / Minus
Query: 388 gctattctaacgaaggtacagtgtgataataattattttgattttcacgatttactcgac 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 gctattctaacgaaggtacagtgtgataataattattttgattttcacgatttactcgac 1149
Query: 448 cttggtacgtagtcttctggcgtacttgttaacagtaccgtcaacacccacaaatgcaaa 507
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 ctcggtacgtagtcttctggcgtacttgttaacagtaccgtcaacacccacaaatgcaaa 1089
Query: 508 ccaatc 513
||||||
Sbjct: 1088 ccaatc 1083
>BF14_729_C3
Length = 2041
Score = 343 bits (173), Expect = 5e-94
Identities = 203/213 (95%)
Strand = Plus / Plus
Query: 515 gaaacccacacatacggacaggtacctcaatggtaactcacaccaccaccctatccagtt 574
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 761 gaaacccacacatacggacaggtacctcaatggttactcacaccaccaccctatccagtt 820
Query: 575 agcaaccgttggcaaatctttgttgcagagagcccaacatctttgtgatgctgaccactc 634
||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 821 agctaccgttggcaaatctttgttacagagagcccaacacctttgtgatgctgaccacct 880
Query: 635 agaggccgagctgcaacatgtaaaacatgctctcaccatcaacaacctgcccgtgcctcg 694
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 881 agaggccgagctgcagcatgtaaaacatgctctcactatcaacaacctgcccgtgcctcg 940
Query: 695 ccagcatagcaagaaccacttgaagccacccac 727
||||||| ||||||||||| |||||||||||||
Sbjct: 941 ccagcatcgcaagaaccacctgaagccacccac 973
>BF01031B2E06
Length = 707
Score = 83.8 bits (42), Expect = 7e-16
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 769 atttatacgcggtagaagtgggagcgagaggtatgacggctaaatctctctacaaactac 828
|||| ||||||||||||||||||||||| | | | | |||||||||||| |||| ||||
Sbjct: 513 atttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaatctctccacaacctac 572
Query: 829 taaaagacttgggcctgtccagaactcacatcaa 862
||||| |||||||||||||||| || |||||||
Sbjct: 573 taaaaaccttgggcctgtccagatctaacatcaa 606
>BF14_335_C2
Length = 1827
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 794 gagaggtatgacggctaaatctctctacaaactactaaaagacttgggcctgtccagaac 853
||||||||| || |||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 854 t 854
|
Sbjct: 1047 t 1047
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,866
Number of extensions: 5947
Number of successful extensions: 5947
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5946
Number of HSP's successfully gapped: 5
Length of query: 1369
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1352
Effective length of database: 8,119,229
Effective search space: 10977197608
Effective search space used: 10977197608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)