BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19612 (UTR included)
(1579 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A1D02 1608 0.0
BF01049A1B08 872 0.0
>BF01045A1D02
Length = 823
Score = 1608 bits (811), Expect = 0.0
Identities = 820/823 (99%)
Strand = Plus / Plus
Query: 115 ttatgttaggtagtgatatttacatataaaaatatttaacttcaatattgacgattatcg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatgttaggtagtgatatttacatataaaaatatttaacttcaatattgacgattatcg 60
Query: 175 tatattcaactacaatatattttgaaagaatttagttcttggaacaacaaattataataa 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatattcaactacaatatattttgaaagaatttagttcttggaacaacaaattataataa 120
Query: 235 actaaataattacttattatatccagctcttattaaaaaaaaaaatggattttaagatgc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actaaataattacttattatatccagctcttattaaaaaaaaaaatggattttaagatgc 180
Query: 295 atgaatacacacatgcagtcgttggtaaagtaattccagcactaaagctaactgatagag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgaatacacacatgcagtcgttggtaaagtaattccagcactaaagctaactgatagag 240
Query: 355 ctgacttgaacgacgcccgtcgtcaatatgattattacttaagattattaaaagaactaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgacttgaacgacgcccgtcgtcaatatgattattacttaagattattaaaagaactaa 300
Query: 415 atttggaaattattgaagtcgaaacagatgcctatttcccggaaaatattatctttgagg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttggaaattattgaagtcgaaacagatgcctatttcccggaaaatattatctttgagg 360
Query: 475 atatagctatcgtttgccatggcataatgcttttgcccagacctgtatccagcactgaag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atatagctatcgtttgccatggcataatgcttttgcccagacctgtatccagcactgaag 420
Query: 535 aaataataatgaccgcactcaaagaggtcatgcaaaatgaacttggacacactgttattg 594
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaataataatgaccgcactaaaagaggtcatgcaaaatgaacttggacacactgttattg 480
Query: 595 aagtcagtgacccagaagccaagcttgccggttccgatgtcttattcacaggtcgtgagt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagtcagtgacccagaagccaagcttgccggttccgatgtcttattcacaggtcgtgagt 540
Query: 655 tttttgtaggcattactgagaccagcaatgaagctggagccagcgccctagctgaggcat 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttttgtaggcattactgagaccagcaatgaagctggagccagcgccctagctgaggcat 600
Query: 715 tcccagagtttccttgcacacctataaaggtatctcaaggggtacgtcatttgaagaagt 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcccagagtttccttgcacacctataaaggtatctcaaggggtacgtcatttgaagaagt 660
Query: 775 acttcagcatggcggggccggatattctgtgtgtggcatccagcaaggaagccaaagaaa 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acttcagcatggcggggccggatattctgtgtgtggcatccagcaaggaagccaaagaaa 720
Query: 835 tgctgaaaaggatagaaagagaggccacatttacctatcagaccctcactgtccctgaag 894
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgctgaagaggatagaaagagaggccacatttacctatcagaccctcactgtccctgaag 780
Query: 895 taggggctgccaattgtttgtatgtgaatggtactcttataca 937
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 781 taggggctgccaattgtttgtatgtgaatggtactctaataca 823
>BF01049A1B08
Length = 839
Score = 872 bits (440), Expect = 0.0
Identities = 458/464 (98%), Gaps = 2/464 (0%)
Strand = Plus / Plus
Query: 285 tttaagatgcatgaatacacacatgcagtcgttggtaaagtaattccagcactaaagcta 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tttaagatgcatgaatacacacatgcagtcgttggtaaagtaattccagcactaaagcta 437
Query: 345 actgatagagctgacttgaacgacgcccgtcgtcaatatgattattacttaagattatta 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actgatagagctgacttgaacgacgcccgtcgtcaatatgattattacttaagattatta 497
Query: 405 aaagaactaaatttggaaattattgaagtcgaaacagatgcctatttcccggaaaatatt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaagaactaaatttggaaattattgaagtcgaaacagatgcctatttcccggaaaatatt 557
Query: 465 atctttgaggatatagctatcgtttgccatggcataatgcttttgcccagacctgtatcc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atctttgaggatatagctatcgtttgccatggcataatgcttttgcccagacctgtatcc 617
Query: 525 agcactgaagaaataataatgaccgcactcaaagaggtcatgcaaaatgaacttggacac 584
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 618 agcactgaagaaataataatgaccgcactaaaagaggtcatgcaaaatgaacttgg--ac 675
Query: 585 actgttattgaagtcagtgacccagaagccaagcttgccggttccgatgtcttattcaca 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 actgttattgaagtcagtgacccagaagccaagcttgccggttccgatgtcttattcaca 735
Query: 645 ggtcgtgagttttttgtaggcattactgagaccagcaatgaagctggagccagcgcccta 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ggtcgtgagttttttgtaggcattactgagaccagcaatgaagctggagccagcgcccta 795
Query: 705 gctgaggcattcccagagtttccttgcacacctataaaggtatc 748
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 796 gctgnnncattcccagagtttccttgcacacctataaaggtatc 839
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,499
Number of extensions: 7563
Number of successful extensions: 7563
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7562
Number of HSP's successfully gapped: 2
Length of query: 1579
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1562
Effective length of database: 8,119,229
Effective search space: 12682235698
Effective search space used: 12682235698
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)