BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19616 (UTR included)
(1339 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A1A09 331 2e-90
>BF01061A1A09
Length = 586
Score = 331 bits (167), Expect = 2e-90
Identities = 294/333 (88%), Gaps = 5/333 (1%)
Strand = Plus / Minus
Query: 419 cattccccttcctaacctctttaccct-ttctctatcttttcttctcctggtttttcccg 477
||||||||| |||||||||||| ||| |||||||||||||| | |||||||||| |||
Sbjct: 579 cattcccctccctaacctctttccccccttctctatcttttcctttcctggttttaccca 520
Query: 478 taaaatggggttttggtggtcaaatggcattcgctccgttaaaaccactcctcgccagtc 537
||||| |||||||||| ||||| | |||| ||||||||||||||||| ||| ||||| ||
Sbjct: 519 taaaacggggttttggaggtcagacggcagtcgctccgttaaaaccattcc-cgccactc 461
Query: 538 atatggttgacaaagttaaaggatttggtacggctagggcgtcgccga---acgacgtgc 594
|||||||| ||||| | ||| | |||||||||||||||||||||| |||||| ||
Sbjct: 460 ttatggttgcaaaagtctatggactgggtacggctagggcgtcgccgataaacgacgcgc 401
Query: 595 aggcatatcgccctacacctacgataagtgggcaagggctaccgtgtcaagcacggacac 654
||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 400 aggcacatcgccctacacctgcgataagtgggcaagggctaccgtgtcaagtacgggcac 341
Query: 655 ggctaaagaagtcagtacccaaacggaaactccgctttgcaacgtgtaatattggctctc 714
||||||||| || ||||||| || |||||||||||||||||||||| |||||||||||||
Sbjct: 340 ggctaaagacgttagtaccccaaaggaaactccgctttgcaacgtggaatattggctctc 281
Query: 715 taaccggacgatacagagaactcgaagatgtac 747
|||||||||||| ||||||||||| ||||||||
Sbjct: 280 taaccggacgatgcagagaactcgcagatgtac 248
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 206,665
Number of extensions: 9899
Number of successful extensions: 9899
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9896
Number of HSP's successfully gapped: 1
Length of query: 1339
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1322
Effective length of database: 8,119,229
Effective search space: 10733620738
Effective search space used: 10733620738
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)