BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19624 (UTR included)
(3535 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A2G06 1461 0.0
>BF01014A2G06
Length = 784
Score = 1461 bits (737), Expect = 0.0
Identities = 740/741 (99%)
Strand = Plus / Plus
Query: 1014 ggggaattattactaccaagggaatcagaagctgagaaaaaggttatgaaaagcttgatt 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggaattattactaccaagggaatcagaagctgagaaaaaggttatgaaaagcttgatt 60
Query: 1074 aatgaaaaacgcaatttcattttaaggttcaaaaaaatgacacagcagcgttctaatccg 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgaaaaacgcaatttcattttaaggttcaaaaaaatgacacagcagcgttctaatccg 120
Query: 1134 cctgaatacatcacatgtcacgtggaagggtctttaagaaaatcagatcgagccggggtt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctgaatacatcacatgtcacgtggaagggtctttaagaaaatcagatcgagccggggtt 180
Query: 1194 tattttgacagcattgttcacatcggtcgtcgggttcgggcaagaggagaaaatccattc 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tattttgacagcattgttcacatcggtcgtcgggttcgggcaagaggagaaaatccattc 240
Query: 1254 gctagtggaaatgatgtagtattcattggcatggtaagacctacaacagagacttttata 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctagtggaaatgatgtagtattcattggcatggtaagacctacaacagagacttttata 300
Query: 1314 acagagagtggtctcgagtcttttaagatggagtatcgaactcgacattctatagatggc 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acagagagtggtctcgagtcttttaagatggagtatcgaactcgacattctatagatggc 360
Query: 1374 gagataatacagtgtgagcaacgcattgctcttgtcacaggctacatgactcatgaagtg 1433
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 gagataatacagtgtgagcaacgcattgcccttgtcacaggctacatgactcatgaagtg 420
Query: 1434 aatggagttaatgcaatgaactttatgcatagagatgacgttcgctgggtgatcatcgca 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatggagttaatgcaatgaactttatgcatagagatgacgttcgctgggtgatcatcgca 480
Query: 1494 ttaagggaaatgtacgacaaacatcgcttggtcggtgaatcatgctatcgattgatgaca 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaagggaaatgtacgacaaacatcgcttggtcggtgaatcatgctatcgattgatgaca 540
Query: 1554 aaaaatggtcagttcatatatatgagaacccttggccatctagatgtagaccaaaactcc 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaaatggtcagttcatatatatgagaacccttggccatctagatgtagaccaaaactcc 600
Query: 1614 aaagaagtaaccagcttcgtatgcacgaacactgttgtcgcggagcacgaaggcaagaaa 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaagaagtaaccagcttcgtatgcacgaacactgttgtcgcggagcacgaaggcaagaaa 660
Query: 1674 cttataaaattgatgaagaagaagttcactctaatgatcaataacaacgaagctgttaaa 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttataaaattgatgaagaagaagttcactctaatgatcaataacaacgaagctgttaaa 720
Query: 1734 gaccttgaagactccgaggtt 1754
|||||||||||||||||||||
Sbjct: 721 gaccttgaagactccgaggtt 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 430,181
Number of extensions: 8470
Number of successful extensions: 8470
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8470
Number of HSP's successfully gapped: 1
Length of query: 3535
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3517
Effective length of database: 8,109,745
Effective search space: 28521973165
Effective search space used: 28521973165
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)