BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19643 (UTR included)
(1420 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B2H06 767 0.0
>BF01045B2H06
Length = 747
Score = 767 bits (387), Expect = 0.0
Identities = 396/399 (99%)
Strand = Plus / Minus
Query: 1022 aagcattgtattaaacttcttgctctattatacactgaaggatcaggtttacggacgtca 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aagcattgtattaaacttcttgctctattatacactgaaggatcaggtttacggacgtca 688
Query: 1082 ggtgtttgatccatgtcttccgcgttgtcgccgtctttgtcttgtgatgcagtccaatca 1141
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggtgtttgatccatatcttccgcgttgtcgccgtctttgtcttgtgatgcagtccaatca 628
Query: 1142 tccatttctttaataatcttgtgtgcatctgtcagaagcatgtttcttatattgccttta 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tccatttctttaataatcttgtgtgcatctgtcagaagcatgtttcttatattgccttta 568
Query: 1202 gctgattcaaaatactctaataaaactggccaggattcatctgggacaagttgtgaagaa 1261
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gctgattcaaaatactccaataaaactggccaggattcatctgggacaagttgtgaagaa 508
Query: 1262 aacttgtttttgtatagccatacttgtttggctttcatgaacttccaattctccctgtca 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aacttgtttttgtatagccatacttgtttggctttcatgaacttccaattctccctgtca 448
Query: 1322 tgtttccactgtgataggtaagtgatacattgtgattttaattgatctttagcagcagat 1381
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgtttccactgtgataggtaggtgatacattgtgattttaattgatctttagcagcagat 388
Query: 1382 tgggcttccgcctgcctttgcgcatgtttttcttttttc 1420
|||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgggcttccgcctgcctttgcgcatgtttttcttttttc 349
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 182,533
Number of extensions: 3594
Number of successful extensions: 3594
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3594
Number of HSP's successfully gapped: 1
Length of query: 1420
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1403
Effective length of database: 8,119,229
Effective search space: 11391278287
Effective search space used: 11391278287
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)