BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19651 (UTR included)
(1690 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B2H06 1382 0.0
>BF01045B2H06
Length = 747
Score = 1382 bits (697), Expect = 0.0
Identities = 740/753 (98%), Gaps = 6/753 (0%)
Strand = Plus / Plus
Query: 428 gttaattgatattatacttagcttgttaagtttcatttagcaattggaacagtaagaaat 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttaattgatattatacttagcttgttaagtttcatttagcaattggaacagtaagaaat 60
Query: 488 aaaaagaacaaatatgggtggtaagaaaaaaaagcaaaacaaaaaaaaacaaattgcaca 547
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 aaaaagaacaaatatgggtggcaagaaaaaaaaacaaaacaaaaaaaaacaaattgcaca 120
Query: 548 ggaagttgaaaatattacccaaattaatactgaaggagaacctaatgcaaacgatcaaga 607
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaagttgaaaatattaaccaaattaatactgaaggagaacctaatgcaaacgatcaaga 180
Query: 608 aaatgataacgaagatgagttagaagacgaaagaggtactaaaagacggttcatcgatga 667
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgataacgaagatgagttagaagacgaaagaggtactaaaagacggttcatcgatg- 239
Query: 668 tgatgatgatgatgatgatgatgacgacaagccaaaaaaatcaaaaaagaaaaagaagca 727
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 240 -----atgatgatgatgatgacgacgacaagccaaaaaaatcaaaaaagaaaaagaagca 294
Query: 728 accagctcctacagaatctactgaaaaaaaaggtaagaaatcaatacgtcaaatgaaaaa 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 accagctcctacagaatctactgaaaaaaaaggtaagaaatcaatacgtcaaatgaaaaa 354
Query: 788 agaaaaacatgcgcaaaggcaggcggaagcccaatctgctgctaaagatcaattaaaatc 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agaaaaacatgcgcaaaggcaggcggaagcccaatctgctgctaaagatcaattaaaatc 414
Query: 848 acaatgtatcacttacctatcacagtggaaacatgacagggagaattggaagttcatgaa 907
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 acaatgtatcacctacctatcacagtggaaacatgacagggagaattggaagttcatgaa 474
Query: 908 agccaaacaagtatggctatacaaaaacaagttttcttcacaacttgtcccagatgaatc 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agccaaacaagtatggctatacaaaaacaagttttcttcacaacttgtcccagatgaatc 534
Query: 968 ctggccagttttattagagtattttgaatcagctaaaggcaatataagaaacatgcttct 1027
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctggccagttttattggagtattttgaatcagctaaaggcaatataagaaacatgcttct 594
Query: 1028 gacagatgcacacaagattattaaagaaatggatgattggactgcatcacaagacaaaga 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gacagatgcacacaagattattaaagaaatggatgattggactgcatcacaagacaaaga 654
Query: 1088 cggcgacaacgcggaagacatggatcaaacacctgacgtccgtaaacctgatccttcagt 1147
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cggcgacaacgcggaagatatggatcaaacacctgacgtccgtaaacctgatccttcagt 714
Query: 1148 gtataatagagcaagaagtttaatacaatgctt 1180
|||||||||||||||||||||||||||||||||
Sbjct: 715 gtataatagagcaagaagtttaatacaatgctt 747
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,169
Number of extensions: 6741
Number of successful extensions: 6741
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6733
Number of HSP's successfully gapped: 1
Length of query: 1690
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1673
Effective length of database: 8,119,229
Effective search space: 13583470117
Effective search space used: 13583470117
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)