BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19652 (UTR included)
(2779 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1D11 801 0.0
BF14_1325_C1 587 e-167
>BF01026A1D11
Length = 675
Score = 801 bits (404), Expect = 0.0
Identities = 413/416 (99%)
Strand = Plus / Plus
Query: 1294 aggtgtatgcagctggtggtgatcccgactctgtcgcaggtgaatttggtcgccattccc 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggtgtatgcagctggtggtgatcccgactctgtcgcaggtgaatttggtcgccattccc 319
Query: 1354 tttacaagatgttgggttacttttcccttgtgggcttgttgcgtctgcactcactgctcg 1413
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 tttacaagatgttgggttacttttcccttgtgggtttgttgcgtctgcactcactgctcg 379
Query: 1414 gagactattaccaagctattaaggtgttggagaacatcgaattgcacaagaaatcccagt 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagactattaccaagctattaaggtgttggagaacatcgaattgcacaagaaatcccagt 439
Query: 1474 attcccatgtaccggcctgccagatctctacttcatactatgtgggcttcgcatacatga 1533
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attctcatgtaccggcctgccagatctctacttcatactatgtgggcttcgcatacatga 499
Query: 1534 tgatgaggagatatgctgacgctatccgcactctgtcatcagcactgttgtacatgcagc 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgatgaggagatatgctgacgctatccgcactctgtcatcagcactgttgtacatgcagc 559
Query: 1594 gtacgaaacagctgttttcatcacgttcctaccagaacgatcagatcaacaagcaaactg 1653
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 gtacgaaacagctgttttcatcacgttcctaccagaacgatcagatcaataagcaaactg 619
Query: 1654 aacagatgtatcatctgctggctatatgtcttgtattgcatccacagtgtgtcgat 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aacagatgtatcatctgctggctatatgtcttgtattgcatccacagtgtgtcgat 675
Score = 781 bits (394), Expect = 0.0
Identities = 403/406 (99%)
Strand = Plus / Plus
Query: 894 aactactgtgacctgttcaactacattctctctgccgagacacccgttccactggaactg 953
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 aactactgtgacctgttcaactacattctctctgccgagacacctgttccactggaactg 60
Query: 954 cctgaccagtggctgtgggaactcattgatgagtttgtctaccaattccagtcttttgct 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctgaccagtggctgtgggaactcattgatgagtttgtctaccaattccagtcttttgct 120
Query: 1014 cagtacaggtctcgtgcaaccaagcttagtgaggctgagattgaagctctcaacactgag 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagtacaggtctcgtgcaaccaagcttagtgaggctgagattgaagctctcaacactgag 180
Query: 1074 aataaggcatggagtgtgctggttatactcaatgtattgcattctcttgttgataagtcc 1133
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataaggcatggagtgtgctggtcatactcaatgtattgcattctcttgttgataagtcc 240
Query: 1134 aatatcaaacgccaattagaggtgtatgcagctggtggtgatcccgactctgttgcaggt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 aatatcaaacgccaattagaggtgtatgcagctggtggtgatcccgactctgtcgcaggt 300
Query: 1194 gaatttggtcgccattccctttacaagatgttgggttacttttcccttgtgggtttgttg 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaatttggtcgccattccctttacaagatgttgggttacttttcccttgtgggtttgttg 360
Query: 1254 cgtctgcactcactgctcggagactattaccaagctattaaggtgt 1299
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtctgcactcactgctcggagactattaccaagctattaaggtgt 406
>BF14_1325_C1
Length = 938
Score = 587 bits (296), Expect = e-167
Identities = 311/316 (98%)
Strand = Plus / Minus
Query: 2293 tacatatatttgtatctttttcacaaatgtaacagaaaagcaaataaataacatgaataa 2352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 tacatatatttgtatctttttcacaaatgtaacagaaaagcaaataaataacatgaataa 879
Query: 2353 atatttttgtattatttcaaccttggcgtatatggtttgtagtgacgttttttcttataa 2412
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 878 atatttttgtattatttcaaccttggcgtgtatggtttgtagtgacgttttttcttataa 819
Query: 2413 aacctttttggttcaactatttggaaattttctctctgtactgtagcgggatggggttct 2472
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 818 aacctttttggttcaactatttggaaattttctctctgtactgtagcgggatagggttct 759
Query: 2473 gtgaattgcttccatggattttcaggtttcaaggcttcttccacattcacatctgttatc 2532
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 758 gtgaattgcttccatggattttcaggtttcaaggcttcttccacattcacatcttttatc 699
Query: 2533 caattattataaatgtcactaaacctgttataagccgccttgagtactggactgtccctc 2592
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 698 caattattataaatgtcactaaacctgttgtaagccgccttgagtactggactgtccttc 639
Query: 2593 ttctctttttcattct 2608
||||||||||||||||
Sbjct: 638 ttctctttttcattct 623
Score = 97.6 bits (49), Expect = 9e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 2731 cttctctatacttcttatacatctgtcattgaaagtctccaaatgtctt 2779
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttctctatacttcttatacatctgtcattgaaagtctccaaatgtctt 576
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,007
Number of extensions: 5568
Number of successful extensions: 5568
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5568
Number of HSP's successfully gapped: 4
Length of query: 2779
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2762
Effective length of database: 8,119,229
Effective search space: 22425310498
Effective search space used: 22425310498
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)