BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19668 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A2A09 1281 0.0
>BF01029A2A09
Length = 671
Score = 1281 bits (646), Expect = 0.0
Identities = 661/665 (99%), Gaps = 2/665 (0%)
Strand = Plus / Plus
Query: 405 atataattcaagcgttaagttcgaagtttaaaagaaaatagggaggcaatgattacggct 464
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9 atataattcaagcgttaagttcgaagtttaaaagaaaatacggaggcaatgattacggct 68
Query: 465 gtttagttacaaaaagttttgatattattaataaagatggatgatcaagcatgtccccgt 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gtttagttacaaaaagttttgatattattaataaagatggatgatcaagcatgtccccgt 128
Query: 525 tgtaaaacaacgaaatacagaaatccatccctaaagttgatggtaaacatttgtggccat 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgtaaaacaacgaaatacagaaatccatccctaaagttgatggtaaacatttgtggccat 188
Query: 585 gctttgtgcgagagctgtgttgatttattgtttttaaaaggatctggttcatgtcctgat 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gctttgtgcgagagctgtgttgatttattgtttttaaaaggatctggttcatgtcctgat 248
Query: 645 tgcaatgttcctttgcgtcgtagtaattttcgtgtacagcttttcgaagattccatggtg 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgcaatgttcctttgcgtcgtagtaattttcgtgtacagcttttcgaagattccatggtg 308
Query: 705 gaaaaagaaatggatataagaaaacgtgttctcaaggactttaacaaaaaagaagaggat 764
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 309 gaaaaagaaatggata--agaaaacgtgttctcaaggattttaacaaaaaagaagaggat 366
Query: 765 ttctcaacactcagagaatataacgattatttagaagaaatagaagtaataatatataat 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttctcaacactcagagaatataacgattatttagaagaaatagaagtaataatatataat 426
Query: 825 ttagtcaataacatagatgtggtcggaacaaacaaaaggatagaacaatataaaagggat 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttagtcaataacatagatgtggtcggaacaaacaaaaggatagaacaatataaaagggat 486
Query: 885 aataaagaacttattatgaaaaacaaagccaaaatcggtagggaagaaatagaattagag 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aataaagaacttattatgaaaaacaaagccaaaatcggtagggaagaaatagaattagag 546
Query: 945 gagatattggaaattgaaaagcaaatggaggaattaagacgtcaggaaatagctaagatg 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gagatattggaaattgaaaagcaaatggaggaattaagacgtcaggaaatagctaagatg 606
Query: 1005 gaggatgaggcgaagaaacagaaaataagagcaaaggaagctttgattgatgagttaatg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gaggatgaggcgaagaaacagaaaataagagcaaaggaagctttgattgatgagttaatg 666
Query: 1065 ttcgc 1069
|||||
Sbjct: 667 ttcgc 671
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 301,166
Number of extensions: 7669
Number of successful extensions: 7669
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7666
Number of HSP's successfully gapped: 1
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)