BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19671 (UTR included)
(1873 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2694_C1 1281 0.0
BF01049B2F08 109 2e-23
BF01024A1H11 103 1e-21
BF14_1793_C1 82 4e-15
>BF14_2694_C1
Length = 1208
Score = 1281 bits (646), Expect = 0.0
Identities = 661/666 (99%)
Strand = Plus / Plus
Query: 154 tccgtttgaacaacaacgggctgggaataaccggtggaaggctattagcgaaggccctgt 213
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 543 tccgtttgaacaacaacggcctgggaataaccggcggaaggctattagcgaaggccctgt 602
Query: 214 cgagtaacacgctgaggttaaaagtattcatagcgggaaggaaccgactcgagaacgacg 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cgagtaacacgctgaggttaaaagtattcatagcgggaaggaaccgactcgagaacgacg 662
Query: 274 gggccaaggctctggctgctgtttttcagtcgatgggcagtcttgaagagttggctatgc 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gggccaaggctctggctgctgtttttcagtcgatgggcagtcttgaagagttggctatgc 722
Query: 334 cgcagaacggtatttatcacactgggatagcggcgctgtcggagtcgttcagacattcac 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cgcagaacggtatttatcacactgggatagcggcgctgtcggagtcgttcagacattcac 782
Query: 394 cgaatttggaggtcattaaccttaatgataacaccataggaccgaagggggctgcctcca 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cgaatttggaggtcattaaccttaatgataacaccataggaccgaagggggctgcctcca 842
Query: 454 tcgctgcggcgttgccgagattaaaaaaattaaaatcaataaatttcggcgactgtctgt 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 tcgctgcggcgttgccgagattaaaaaaattaaaatcaataaatttcggcgactgtctgt 902
Query: 514 tgaagagcgccggggcgaaggcgctggctcaggggataaaggactacaacgtactgctcg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tgaagagcgccggggcgaaggcgctggctcaggggataaaggactacaacgtactgctcg 962
Query: 574 agtccattgagttaagccacaatgagattggtcgggaggcttgcatgcaactggttgagg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 agtccattgagttaagccacaatgagattggtcgggaggcttgcatgcaactggttgagg 1022
Query: 634 ctctgacaatacaaccgggggccaaggatagactgacgagagttaatctagccggcaaca 693
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1023 ctctgacaatacaaccgggggccaaggataggctgacaagagttaatctagccggcaaca 1082
Query: 694 gtttgggtggagcggccaataagaaaatcatgaaggataagctgggagcctccgctgaac 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 gtttgggtggagcggccaataagaaaatcatgaaggataagctgggagcctccgctgaac 1142
Query: 754 tcagcgatggggaaggaagtgacgaggaatatgagtcggagtcggaacattctgactacc 813
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 tcagcgattgggaaggaagtgacgaggaatatgagtcggagtcggaacattctgactacc 1202
Query: 814 agtctg 819
||||||
Sbjct: 1203 agtctg 1208
>BF01049B2F08
Length = 791
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Minus
Query: 1819 ggcgcattttcattggtcgataagtcggtagttagcccgattgcggggagtaccc 1873
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ggcgcattttcattggtcgataagtcggtagttagcccgattgcggggagtaccc 709
>BF01024A1H11
Length = 787
Score = 103 bits (52), Expect = 1e-21
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1814 ttaaaggcgcattttcattggtcgataagtcggtagttagcccgattgcggggagtaccc 1873
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 476 ttaaaggcacattttcattggtcgataagtcggtagttagcccgattgcgggaagtaccc 535
>BF14_1793_C1
Length = 1130
Score = 81.8 bits (41), Expect = 4e-15
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 1817 aaggcgcattttcattggtcgataagtcggtagttagcccg 1857
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 aaggcgcattttcattggtcgataagtcggtagttagcccg 928
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,451
Number of extensions: 5462
Number of successful extensions: 5462
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5462
Number of HSP's successfully gapped: 4
Length of query: 1873
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1856
Effective length of database: 8,119,229
Effective search space: 15069289024
Effective search space used: 15069289024
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)