BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19675 (UTR included)
(1819 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1793_C1 109 2e-23
BF01049B2F08 107 6e-23
BF01024A1H11 98 6e-20
>BF14_1793_C1
Length = 1130
Score = 109 bits (55), Expect = 2e-23
Identities = 77/84 (91%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 1736 aattcttgatagtacgatgaccttaaatttttaatttttttttttcggtatatctttgtc 1795
|||||||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct: 480 aattcttgatagtacgatgaccttaaatttttaatttttttt----ggaatatctttttt 535
Query: 1796 tgagatgccactaatgtttaactt 1819
||||||||||||||||||||||||
Sbjct: 536 tgagatgccactaatgtttaactt 559
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 16 cgggctaactaccgacttatcgaccaatgaaaatgcgccttaa 58
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 cgggctaactaccgacttatcgaccaatgaaaatgcgccttaa 970
>BF01049B2F08
Length = 791
Score = 107 bits (54), Expect = 6e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 1 ggtactccccgcaatcgggctaactaccgacttatcgaccaatgaaaatgcgcc 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ggtactccccgcaatcgggctaactaccgacttatcgaccaatgaaaatgcgcc 763
>BF01024A1H11
Length = 787
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 1 ggtactccccgcaatcgggctaactaccgacttatcgaccaatgaaaatgcgccttaaac 60
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 534 ggtacttcccgcaatcgggctaactaccgacttatcgaccaatgaaaatgtgcctttaac 475
Query: 61 g 61
|
Sbjct: 474 g 474
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 339,351
Number of extensions: 10644
Number of successful extensions: 10644
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 10643
Number of HSP's successfully gapped: 4
Length of query: 1819
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1802
Effective length of database: 8,119,229
Effective search space: 14630850658
Effective search space used: 14630850658
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)