BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19682 (UTR included)
(1645 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_520_C1 1362 0.0
>BF14_520_C1
Length = 1049
Score = 1362 bits (687), Expect = 0.0
Identities = 715/727 (98%)
Strand = Plus / Plus
Query: 384 accacaatcaaagtgtacgcccgatgtctccgtccggacattgagtacaagaccttgtcg 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 accacaatcaaagtgtacgcccgatgtctccgtccggacattgagtacaagaccttgtcg 382
Query: 444 gtgacgtggggcactcgcgccaaggaggtggtggcgaccctgctggggaagttccggatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtgacgtggggcactcgcgccaaggaggtggtggcgaccctgctggggaagttccggatg 442
Query: 504 aggcaccgggacccgaggctgttctatcttagtatggaggttcgagtgagggccgcgggc 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aggcaccgggacccgaggctgttctatcttagtatggaggttcgagtgagggccgcgggc 502
Query: 564 ctgaggactactctactgctagatgacgacgcgcgccccgccgcactgcaggcctgtcat 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctgaggactactctactgctagatgacgacgcgcgccccgccgcactgcaggcctgtcat 562
Query: 624 cctaagggatattccaagttctcccttcagatgcgtccaggaggtctcgtgaagatatac 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cctaagggatattccaagttctcccttcagatgcgtccaggaggtctcgtgaagatatac 622
Query: 684 gactcggcgctgatgtcttcctctcaatacaagtgtatcctggccagtgagaggaccacg 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gactcggcgctgatgtcttcctctcaatacaagtgtatcctggccagtgagaggaccacg 682
Query: 744 gccgatgagctcctcgcaatattactacattgttatgattcaacggagggtgtagaacga 803
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gccgacgagctcctcgccatattactacattgttatgattcaacggagggtgtagaacga 742
Query: 804 ttttcgctctatgaggtgtcgccatctcaagaatacgaaaggaagttacatccagacgac 863
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 743 ttttcgctctatgaggtgtcgccatctcaagaatacgaacggaagttacatccagacgac 802
Query: 864 ttaccgctgatggtgcagcgcgcttggccccaagacagcgactgtcacttcagagtgaga 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ttaccgctgatggtgcagcgcgcttggccccaagacagcgactgtcacttcagagtgaga 862
Query: 924 agaaaccctcgggcgccaccgctcccgccgcgaaccctccccataccttccctctctctt 983
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 863 agaaaccctcgggcgccaccgctcccgccgcgaaccctccccatacctaccctctctctt 922
Query: 984 cctgccccttcaccggaacccgtgcaagaggacgacgagccctccagagcactatcagcc 1043
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 923 cctgccccttcaccggaacccgtgcaagnnnacgacgagccctccagnncactatcagcc 982
Query: 1044 ctgtctctcgagtcggaaggagacaagagatacagtcccgtgtacaagtttcccagcata 1103
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 ctgtctctcgagtcggannnagacaagagatacagtcccgtgtacaagtttcccagcata 1042
Query: 1104 agttact 1110
|||||||
Sbjct: 1043 agttact 1049
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 153,647
Number of extensions: 2445
Number of successful extensions: 2445
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2445
Number of HSP's successfully gapped: 1
Length of query: 1645
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1628
Effective length of database: 8,119,229
Effective search space: 13218104812
Effective search space used: 13218104812
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)