BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19686 (UTR included)
(1966 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_273_C1 1972 0.0
BF01029B1H08 1384 0.0
BF14_2397_C1 196 9e-50
>BF14_273_C1
Length = 1117
Score = 1972 bits (995), Expect = 0.0
Identities = 1055/1074 (98%), Gaps = 7/1074 (0%)
Strand = Plus / Plus
Query: 892 tagaggcggccgaggctggggacagtgatggcgagggaggcggagacggcgatgaagctg 951
||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tagaggcggccgaggctggggacagtgatgg------aggcggagacggcgatgaagctg 54
Query: 952 atggtgacgatgacgctgatgatgatgaggccgaggacatggagaacttccaggagtctg 1011
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atggtgatgatgacgctgatgatgatgaggccgaggacatggagaacttccaggagtctg 114
Query: 1012 gactactcgatgaagtggacccatctacagcgctgacgacccgcaaggagccgaggaaga 1071
|||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 115 gactgctggatgaagtggacccatctacagcgctgacaacccgcaaggagccgaggaaga 174
Query: 1072 cggtgaaacacacggacggcgacgagatagtgaagacgaggacctacgacctccacatca 1131
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cggtgaaacacacggacgaagacgagatagtgaagacgaggacctacgacctccacatca 234
Query: 1132 catacgataagtactaccagacgccgcgcctctggctcatcggatacgacgaggagcggc 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 catacgataagtactaccagacgccgcgcctctggctcatcggatacgacgaggagcggc 294
Query: 1192 ggctgctgagtgtggaggccatgtacgaggacgtgtcccaggaccacgccaagaagaccg 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggctgctgagtgtggaggccatgtacgaggacgtgtcccaggaccacgccaagaagaccg 354
Query: 1252 tcaccatggagacgcacccacacctctccggacccagcatggcgtccgtacatccctgca 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcaccatggagacgcacccacacctctccggacccagcatggcgtccgtacatccctgca 414
Query: 1312 gacacgcggaggtgatgaagaagatcatcgagacggtgatggagagcggcggcgcgctgg 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gacacgcggaggtgatgaagaagatcatcgagacggtgatggagagcggcggcgcgctgg 474
Query: 1372 ccgtgcactcctacctcatagtgttcctgaagttcgtgcagaccgtcatccccaccatcg 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ccgtgcactcctacctcatagtgttcctgaagttcgtgcagaccgtcatccccaccatcg 534
Query: 1432 agtacgacttcacgcagaacttctccatgaactgaaccccctcccctcccccaccgcgtt 1491
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 535 agtacgacttcacgcagaacttctccatgaactgaa-cccctcccctcccccaccgcgtt 593
Query: 1492 cgcttgccgagcttgcagtctgcctctcatcacccttcaagggacgacgcttcaggaata 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cgcttgccgagcttgcagtctgcctctcatcacccttcaagggacgacgcttcaggaata 653
Query: 1552 attcgcttcgtgtcgcgtggctcggtgtgatgtctttatttttatataaacgctatgtta 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 attcgcttcgtgtcgcgtggctcggtgtgatgtctttatttttatataaacgctatgtta 713
Query: 1612 cttgcatttttaataaaatttcttaaaaaatgtatccttgtaacgaatactgacattgaa 1671
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cttgcatttttaataagatttcttaaaaaatgtatccttgtaacgaatactgacattgaa 773
Query: 1672 ataaaaacattatatactcaatttttaaaaatacatcactttttgtaatgtctttaaaaa 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ataaaaacattatatactcaatttttaaaaatacatcactttttgtaatgtctttaaaaa 833
Query: 1732 atatagaggcttatgatacaattagctaaacatcgctcactgtggtctcagaactcaaag 1791
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 834 atatagaggcttatgatacaattagctaaacatcgctcactgcggtctcagaactcaaag 893
Query: 1792 gatgataatttcagtacacataaaaaacgaggcacaaaagattatatacaggtatagttt 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gatgataatttcagtacacataaaaaacgaggcacaaaagattatatacaggtatagttt 953
Query: 1852 tctacaacaagcagccggcggtgcagcgagcggcctctacgccatcgtgacattgcatgg 1911
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 954 tctacaacaaggagccggcggtgcagcgagcggcctctacgccatcgtgaccttgtatgg 1013
Query: 1912 cggcctgcgggtagctggagataactacattagttttgcatttgtattgtatac 1965
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1014 cggcctgcgggtagctggagataactacattagttttgcatttgtactgtatac 1067
>BF01029B1H08
Length = 771
Score = 1384 bits (698), Expect = 0.0
Identities = 747/766 (97%)
Strand = Plus / Plus
Query: 396 ccgagtgcacggtgaattaatttttgatctcgaaataaagctacataaaaggatatcgta 455
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6 ccgagtgctcggtgaattaatttttgatctcgaaataaagctacataaaaagatatcgta 65
Query: 456 aattgtttatttcccctttaatttgtgtttactattgatgtaaatatgcagagcgtaata 515
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aattgtttatttctcctttaatttgtgtttactattgatgtaaatatgcagagcgtaata 125
Query: 516 aacacagtaaagggaaccgccctcggggtagcagggtacttgacgcctgtattaaaggaa 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aacacagtaaagggaaccgccctcggggtagcagggtacttgacgcctgtattaaaggaa 185
Query: 576 tctaaatttcaagagactggagtgttgacccctgaagagtttgttgcggccggagatcac 635
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 186 tctaaatttcaagagactggagtgttgacccctgaagagtttgtggcggccggagatcac 245
Query: 636 ttagtccaccactgcccaacttggcagtgggccaagggtgaagagtccaaaatcaggccc 695
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttagtccaccactgcccaacctggcagtgggccaagggtgaagagtccaaaatcaggccc 305
Query: 696 tacttgccctctgacaagcagttcctcataaccagaaatgttccatgctataggcgctgt 755
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 306 tacttgccctccgacaagcagttcctcataaccagaaatgttccatgctacaggcgctgt 365
Query: 756 aaacagatagaatattgtgatgaacatgaaaagacaatagaagatgagaatgacgaggac 815
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 366 aaacagatagaatattgtgatgaacatgaaaagacaatagaagacgagaatgacgaggac 425
Query: 816 ggaggctgggtggacacacatcactacgcctcaccagggttccctgcagttgaagagaag 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggaggctgggtggacacacatcactacgcctcaccagggttccctgcagttgaagagaag 485
Query: 876 gtgtgtgagatgacgttagaggcggccgaggctggggacagtgatggcgagggaggcgga 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtgtgtgagatgacgttagaggcggccgaggctggggacagtgatggcgagggaggcgga 545
Query: 936 gacggcgatgaagctgatggtgacgatgacgctgatgatgatgaggccgaggacatggag 995
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 546 gacggcgatgaagctgatggtgatgatgacgctgatgatgatgaggccgaggacatggag 605
Query: 996 aacttccaggagtctggactactcgatgaagtggacccatctacagcgctgacgacccgc 1055
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 606 aacttccaggagtctggactgctggatgaagtggacccatctacagcgctgacgacccgc 665
Query: 1056 aaggagccgaggaagacggtgaaacacacggacggcgacgagatagtgaagacgaggacc 1115
||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 666 aaggagccgnnnaagacggtgaaacacacggacggcgacgagatagtgaagannnnnacc 725
Query: 1116 tacgacctccacatcacatacgataagtactaccagacgccgcgcc 1161
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tacgacctccacatcacatacgataagtactaccagacgccgcgcc 771
>BF14_2397_C1
Length = 819
Score = 196 bits (99), Expect = 9e-50
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 1 gattatatacgaattataaaccttttaaactatttagctttatatctgtatgaaactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gattatatacgaattataaaccttttaaactatttagctttatatctgtatgaaactcaa 40
Query: 61 tcacattatactgtggtaaatcgtaattattgtgatact 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tcacattatactgtggtaaatcgtaattattgtgatact 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,795
Number of extensions: 5241
Number of successful extensions: 5241
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5240
Number of HSP's successfully gapped: 3
Length of query: 1966
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1949
Effective length of database: 8,119,229
Effective search space: 15824377321
Effective search space used: 15824377321
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)