BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19694 (UTR included)
(3913 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A2E10 1041 0.0
>BF01019A2E10
Length = 742
Score = 1041 bits (525), Expect = 0.0
Identities = 611/637 (95%), Gaps = 4/637 (0%)
Strand = Plus / Plus
Query: 3229 tggagtcggtggtagtgttgaaggaggacgtagaggacgcgctccgggagacttcgccct 3288
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 tggagtcggtggtagtgttgaaggaggacgtnnnggacgcgctccgggagacttcgccct 63
Query: 3289 cgctgtcaccagaacagaggctgttctatgacactatctaccgtcgtttccgcggggagc 3348
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 64 cgctgtcaccagaacagaggctgttctatgacaccatctaccgtcgtttccgcggggagc 123
Query: 3349 cgctctccccgcaacagacgcgcctgcagcatcgcctcgaccgccagagagtcacactcg 3408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cgctgtccccgcaacagacgcgcctgcagcatcgcctcgaccgccagagagtcacactcg 183
Query: 3409 cctgatgtcattcatgatacgatatgatatggtatgggttacgggctgtggtttgaccgt 3468
||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 184 cctgatgtc-ttcatgataagatatgatatggtacaggttacgggctgtggtttgatcgt 242
Query: 3469 cttcttgtctggtgtcggccatcacttcctgtcgcggacgcttcctgctaagcgttcg-- 3526
||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cttctcgcctggtgacggccatcacttcctgtcgcggacgcttcctgctaagcgttcgcg 302
Query: 3527 ggaatcacgaatgttatttcttgttttattcttcactaaacgtttaattacaatattttt 3586
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggaatcacggatgttatttcttgttttattcttcactaaacgtttaattacaatattttt 362
Query: 3587 atggcataattttttgcattagctgtcaggccaaagttgttagtcattgccttaattgta 3646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atggcataattttttgcattagctgtcaggccaaagttgttagtcattgccttaattgta 422
Query: 3647 ataagaaagcgttatccgaactaagtgggggacatgggttttataaaaccggtgtttttg 3706
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 423 ataagaaagcgttatccgaactaagtgggggacatgggttttataaaaccggtagttttg 482
Query: 3707 gacaatcggtataattcaaaaaaaaatcagtcttcgtctgccgaagctgagctacccgct 3766
|||||||||||||| | |||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 483 gacaatcggtataa-taaaaaaaaattcaatcttcgtccgccgaagctgagctacccgct 541
Query: 3767 gacgggtggacaggtcacgtgttttttaagcaaagttatttgttgctgctcgctttcagg 3826
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 542 gacgggtggacaggtcacgtgatttttaagcacagttatttgttgctgctcgctttcagg 601
Query: 3827 ccatgatctgaaccaacaagccgatgtcaacgcgcta 3863
||||||||||||||||||||||||||||||| |||||
Sbjct: 602 ccatgatctgaaccaacaagccgatgtcaacccgcta 638
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 407,901
Number of extensions: 7589
Number of successful extensions: 7589
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7586
Number of HSP's successfully gapped: 1
Length of query: 3913
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3895
Effective length of database: 8,109,745
Effective search space: 31587456775
Effective search space used: 31587456775
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)