BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19696 (UTR included)
(1609 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B1H09 1473 0.0
>BF01024B1H09
Length = 767
Score = 1473 bits (743), Expect = 0.0
Identities = 761/767 (99%), Gaps = 1/767 (0%)
Strand = Plus / Plus
Query: 298 ctcctcgtctgtgcccattcactattgtgccatacatagctgatgttaaaagttc-gtgt 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcctcgtctgtgcccattcactattgtgccatacatagctgatgttaaaagttccnnnn 60
Query: 357 ttgaatacaataaccgacatgtcgactctcagtcatcacccgtacgcgttctcgatgcac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaatacaataaccgacatgtcgactctcagtcatcacccgtacgcgttctcgatgcac 120
Query: 417 cctggcatgttaccggagtacccgagcgcgccgcagccgctgccggcctcgtcgccgcag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctggcatgttaccggagtacccgagcgcgccgcagccgctgccggcctcgtcgccgcag 180
Query: 477 tccgagggacacatcaagcggcccatgaacgccttcatggtctggtccaggctacaacgt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccgagggacacatcaagcggcccatgaacgccttcatggtctggtccaggctacaacgt 240
Query: 537 cgccagatcgccaaggataatccgaagatgcacaattcggagatatcgaaacggctcgga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgccagatcgccaaggataatccgaagatgcacaattcggagatatcgaaacggctcgga 300
Query: 597 gccgaatggaagctgttgtctgaaatgcagaagagaccattcattgacgaagcaaaacga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccgaatggaagctgttgtctgaaatgcagaagagaccattcattgacgaagcaaaacga 360
Query: 657 ctccgagctctccatatgaaagagcaccccgactacaagtaccggccacgaaggaagccc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctccgagctctccatatgaaagagcaccccgactacaagtaccggccacgaaggaagccc 420
Query: 717 aagccaccgacagcgggaggagctccgggcgctggagctttcccgagctttccactgcct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagccaccgacagcgggaggagctccgggcgctggagctttcccgagctttccactgcct 480
Query: 777 tacttcgcgggtccagcaccgaccgttggaccgttggacgccctttcgtattcggcagtg 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacttcgcgggtccagcaccgaccgttggaccgttggacgccctttcgtattcggcagtg 540
Query: 837 cctccatacttcccacatcagctggatcacttgcaattctcaaaactaatggctccgacc 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctccatacttcccacatcagctggatcacttgcaattctcaaaactaatggctccgacc 600
Query: 897 gagaagttgccgacggcatcttcagctgccgctgtggtgtcgtcgttctattcatcactc 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagaagttgccgacggcatcttcagctgccgctgtggtgtcgtcgttctattcatcactc 660
Query: 957 tacacacagccggccgcacctccgaagccgttcccatctcctctgttccaccagtacgga 1016
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 661 tacacacagccggccgcacctccaaagccgttcccatctcctctgttccaccagtacgga 720
Query: 1017 gcagcgccggcttctcctgtgtctccggtgacttccacgcagcacag 1063
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcagcgccggcttctcctgtgtctccggtgacttccacgcagcacag 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 132,281
Number of extensions: 2239
Number of successful extensions: 2239
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2238
Number of HSP's successfully gapped: 1
Length of query: 1609
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1592
Effective length of database: 8,119,229
Effective search space: 12925812568
Effective search space used: 12925812568
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)