BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19726 (UTR included)
(2233 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A2C06 135 3e-31
BF01047A1G11 125 3e-28
BF14_911_C2 113 1e-24
BF01055A2F06 111 5e-24
BF01055A2B03 92 5e-18
BF01016B1A11 74 1e-12
BF01014B2B09 72 4e-12
>BF01030A2C06
Length = 599
Score = 135 bits (68), Expect = 3e-31
Identities = 117/132 (88%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 386 atcaatcaatacatattacaaaacaaagtccctcgacgcgtctgtctgtctgtgtgttca 445
|||||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||
Sbjct: 590 atcaatcaatacgtattataaaacaaagtccctcgcggcgtctgtctgtctgtctgttcg 531
Query: 446 cgataaacggaaaaactactgcaccgattatcaagcagttatta-cactcgagagcatga 504
||||||||||||||||| ||||||| | |||||| |||||| | ||||||| ||| |||
Sbjct: 530 cgataaacggaaaaactgctgcaccaaatatcaaacagttaccaccactcgaaagcgtga 471
Query: 505 ttctcgaggaag 516
||||||||||||
Sbjct: 470 ttctcgaggaag 459
>BF01047A1G11
Length = 812
Score = 125 bits (63), Expect = 3e-28
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 2167 catctatattctgttccgcactacttatcagcgccggcgggaggcttgcgcaataactct 2226
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 catctatactctgttccgcactacttatcagcgccggcgggaggcttgcgcaataactct 70
Query: 2227 ttacata 2233
|||||||
Sbjct: 71 ttacata 77
>BF14_911_C2
Length = 1025
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 411 aagtccctcgacgcgtctgtctgtctgtgtgttcacgataaacggaaaaactactgcacc 470
|||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |
Sbjct: 329 aagtccctcgccgcgtctgtctgtctgtgtgttcccgagaaacggaaaaactactgcagc 270
Query: 471 gattatcaagcagttat 487
||||||||| |||||||
Sbjct: 269 gattatcaaacagttat 253
>BF01055A2F06
Length = 787
Score = 111 bits (56), Expect = 5e-24
Identities = 105/120 (87%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 398 atattacaaaacaaagtccctcgacgcgtctgtctgtctgtgtgttcacgataaacggaa 457
|||||| |||||||||||||||| || ||||||||||||| || || ||||||| |||
Sbjct: 599 atattataaaacaaagtccctcgctgcttctgtctgtctgtctgatcgagataaacagaa 658
Query: 458 aaactactgcaccgattatcaagcagttatta-cactcgagagcatgattctcgaggaag 516
|||||||||||||||||||||| ||||||| | | ||||| ||| |||||||||||||||
Sbjct: 659 aaactactgcaccgattatcaaacagttatcaccgctcgatagcgtgattctcgaggaag 718
>BF01055A2B03
Length = 776
Score = 91.7 bits (46), Expect = 5e-18
Identities = 92/106 (86%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 412 agtccctcgacgcgtctgtctgtctgtgtgttcacgataaacggaaaaactactgcaccg 471
||||| ||| |||||| ||| |||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 629 agtccttcgccgcgtccgtccgtctgtttgttcgcgataaacggaaaaactacagcaccg 570
Query: 472 attatcaagcagttatta-cactcgagagcatgattctcgaggaag 516
|| ||||| ||||||| | ||||||| ||| |||| ||||||||||
Sbjct: 569 atcatcaaacagttatcaccactcgatagcgtgatcctcgaggaag 524
>BF01016B1A11
Length = 786
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 435 ctgtgtgttcacgataaacggaaaaactactgcaccgattatcaagcagttat 487
|||| ||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 567 ctgtctgttcgcgataaaaggaaaaactactgcaccgattatcaaacagttat 515
>BF01014B2B09
Length = 794
Score = 71.9 bits (36), Expect = 4e-12
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 394 atacatattacaaaacaaagtccctcgacgcgtctgtctgtctgtgtgttcacgataaac 453
|||||||||| ||| ||||| || || ||||||||||| ||||| ||||| | ||||||
Sbjct: 214 atacatattattaaataaagtaccccgccgcgtctgtctatctgtctgttcgcaataaac 273
Query: 454 ggaaaaactactgcaccgattatcaagc 481
||||||||||| |||||||| ||||||
Sbjct: 274 agaaaaactactacaccgattgtcaagc 301
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 200,873
Number of extensions: 3421
Number of successful extensions: 3421
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3417
Number of HSP's successfully gapped: 7
Length of query: 2233
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2216
Effective length of database: 8,119,229
Effective search space: 17992211464
Effective search space used: 17992211464
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)