BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19735 (UTR included)
(1801 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011A2B12 1546 0.0
BF01028B1H11 323 6e-88
>BF01011A2B12
Length = 788
Score = 1546 bits (780), Expect = 0.0
Identities = 786/788 (99%)
Strand = Plus / Plus
Query: 444 gcaaactttctggttttgatatggtttcagtctcttaacttcgactaaaggtttataatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaaactttctggttttgatatggtttcagtctcttaacttcgactaaaggtttataatg 60
Query: 504 gcggattctggagttgatacaggtaacgaaagtagtgacaatcctgtttttgaccattct 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcggattctggagttgatacaggtaacgaaagtagtgacaatcctgtttttgaccattct 120
Query: 564 tattgtgttttggagtttaatcctcctgcaataccaataaatttggctggacaaccaatg 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattgtgttttggagtttaatcctcctgcaataccaataaatttggctggacaaccaatg 180
Query: 624 cctgtagactttttaggcgagccccacgaccatataggaaaaataaagtgttcaacaaaa 683
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 cctgtagactttttaggcgagccccatgaccatataggaaaaataaagtgttcaacaaaa 240
Query: 684 gctcgtcactgcagattgaaatatcgttatggaagatctatttgctcatcaagaaataag 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctcgtcactgcagattgaaatatcgttatggaagatctatttgctcatcaagaaataag 300
Query: 744 aagttgcggtttgctgcgtccaccaataacacagagctagtagaaaagcttttattatca 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttgcggtttgctgcgtccaccaataacacagagctagtagaaaagcttttattatca 360
Query: 804 ggtgctgatccaaattgctcagatgaacataaaagaagccccttgcatttagcagcttgt 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtgctgatccaaattgctcagatgaacataaaagaagccccttgcatttagcagcttgt 420
Query: 864 agaggttatgttgatgttattaaaatgttaataagacatggcgcaaatccaaacaataag 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaggttatgttgatgttattaaaatgttaataagacatggcgcaaatccaaacaataag 480
Query: 924 gatactctaggcaacacgcccctccacctcgctgcttgcactaatcacattcctgttgtt 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatactctaggcaacacgcccctccacctcgctgcttgcactaatcacattcctgttgtt 540
Query: 984 attgagctcctcgatgcaggcactgatgtcagttccaatgataaaaatggtcgcaatcct 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attgagctcctcgatgcaggcactgatgtcagttccaatgataaaaatggtcgcaatcct 600
Query: 1044 atacagcttgctcagagcaaactaaaactcattcaaatgagacctagtggagctgggcat 1103
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atacagctcgctcagagcaaactaaaactcattcaaatgagacctagtggagctgggcat 660
Query: 1104 tttgaggaaacaaagcagctcatcagtgaaatatgtctggttgtggaaatgatgcttaaa 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttgaggaaacaaagcagctcatcagtgaaatatgtctggttgtggaaatgatgcttaaa 720
Query: 1164 tatatgaaaatacagaaagctgatgctggtgaaattgaatctgttagagaaagacttgaa 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tatatgaaaatacagaaagctgatgctggtgaaattgaatctgttagagaaagacttgaa 780
Query: 1224 aatgtcag 1231
||||||||
Sbjct: 781 aatgtcag 788
>BF01028B1H11
Length = 562
Score = 323 bits (163), Expect = 6e-88
Identities = 172/175 (98%)
Strand = Plus / Minus
Query: 1627 tttttccaatcataaccatttattgacatcatttgtcatttaaaattcatttcattataa 1686
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 560 ttttttcaatcataaccatttattgacatcatttgtcatttaaaattcattttattataa 501
Query: 1687 agctaattggaatatttttattaatgagtaggaatatttccggaatgtaggaaacttata 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agctaattggaatatttttattaatgagtaggaatatttccggaatgtaggaaacttata 441
Query: 1747 aaataatattcaatcaacataagtattaaaaataagaggtaccataaaacccatg 1801
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atataatattcaatcaacataagtattaaaaataagaggtaccataaaacccatg 386
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,842
Number of extensions: 6788
Number of successful extensions: 6788
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6788
Number of HSP's successfully gapped: 2
Length of query: 1801
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1784
Effective length of database: 8,119,229
Effective search space: 14484704536
Effective search space used: 14484704536
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)