BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19753 (UTR included)
(861 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2A04 557 e-158
BF14_619_C1 208 1e-53
BF01042A1B12 68 3e-11
>BF01041A2A04
Length = 814
Score = 557 bits (281), Expect = e-158
Identities = 281/281 (100%)
Strand = Plus / Plus
Query: 41 gtgatcctcgagaaaacgattcgtatccctcgttcgctgtcggtgaaggccgcgtccgtg 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gtgatcctcgagaaaacgattcgtatccctcgttcgctgtcggtgaaggccgcgtccgtg 593
Query: 101 ctgaaaggcttcctgaacaagagtcccgtggagaggctcggctgcggagacaacggcttc 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ctgaaaggcttcctgaacaagagtcccgtggagaggctcggctgcggagacaacggcttc 653
Query: 161 ctcgacatcgtaaaccatcccttcttcaagagcatcgagtgggaaatgttggaacagaag 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ctcgacatcgtaaaccatcccttcttcaagagcatcgagtgggaaatgttggaacagaag 713
Query: 221 caggtggtgccgccgttcaagccgcgcctggagggtgagagggacctcgccaatttcccg 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 caggtggtgccgccgttcaagccgcgcctggagggtgagagggacctcgccaatttcccg 773
Query: 281 ccagagttcaccgacgagcccgtacacctcacaccggacga 321
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ccagagttcaccgacgagcccgtacacctcacaccggacga 814
>BF14_619_C1
Length = 793
Score = 208 bits (105), Expect = 1e-53
Identities = 220/257 (85%), Gaps = 6/257 (2%)
Strand = Plus / Plus
Query: 367 tcccgtttctaacacgtcgctccggcattctgccgtcgagggacgtcatgtaatccaata 426
|||||||||| || |||||||||||| ||||||||||| ||| ||||||| ||||| ||
Sbjct: 25 tcccgtttcttacgcgtcgctccggcgttctgccgtcggggggcgtcatgcaatcccatc 84
Query: 427 t-ccgatttcattc-----tccactacaacgacgtcctaagccgaggtccggcctcttag 480
| ||||| ||| | |||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 85 ttccgatgccatcccccactccacttcaacgacgtactaagccgaggtccggcctcttag 144
Query: 481 aggcacccttgggacgggcgtatccctccatcgggcccttcgggcccgcattaaacggct 540
||||||||||||||||||||||| |||| |||||||||||||||| | ||||||| | |
Sbjct: 145 aggcacccttgggacgggcgtatatctccgtcgggcccttcgggcctgaattaaactggt 204
Query: 541 aggtcccatcgggacgcccacccctcccggtgacgctgtaaaagccaatagggctaacag 600
|||| |||||||| | ||||| ||||||||| | |||||||||||||||||| ||||||
Sbjct: 205 aggttccatcgggccatccaccactcccggtggcactgtaaaagccaatagggttaacag 264
Query: 601 ctactgtcaactcgaaa 617
|||| | ||| ||||||
Sbjct: 265 ctacagacaagtcgaaa 281
>BF01042A1B12
Length = 787
Score = 67.9 bits (34), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 447 caacgacgtcctaagccgaggtccggcctcttagaggcacccttgggacgggcgtatc 504
||||||||||||| || ||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 615 caacgacgtccta-gctgagatctggccttttagaggcacccttgggacgggcgtatc 559
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 130,484
Number of extensions: 19888
Number of successful extensions: 19888
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 19887
Number of HSP's successfully gapped: 3
Length of query: 861
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 844
Effective length of database: 8,119,229
Effective search space: 6852629276
Effective search space used: 6852629276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)