BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19759 (UTR included)
(1884 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 1219 0.0
BF01049A2D11 202 1e-51
BF14_729_C1 194 4e-49
>BF14_729_C3
Length = 2041
Score = 1219 bits (615), Expect = 0.0
Identities = 633/639 (99%)
Strand = Plus / Plus
Query: 233 agagcccaacatctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaacat 292
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 agagcccaacacctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaacat 908
Query: 293 gctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaagcacctgaagcca 352
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 909 gctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaaccacctgaagcca 968
Query: 353 cccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaata 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 cccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaata 1028
Query: 413 ggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgagc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 ggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgagc 1088
Query: 473 caattcttgagaccaatcaagagtaacattcctttacaacaagcgggtgtatacaaactc 532
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 caattcttgagaccaatcaaaagtaacattcctttacaacaagcgggtgtatacaaactc 1148
Query: 533 gactgtgactgtgtcttgtcatacattggacagacgaagaggagcatcggtacaagggtt 592
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1149 gactgtgactgtggcttgtcatacattggacagacgaagaggagcatcggtacaagagtt 1208
Query: 593 aaggaacacatctcagatatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaacac 652
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 aaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaacac 1268
Query: 653 acaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcgggaa 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 acaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcgggaa 1328
Query: 713 gacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaatttc 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 gacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaatttc 1388
Query: 773 aatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaa 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 aatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaa 1448
Query: 833 tcccatgtccgaaaccacaccgcaggacctcaagacacc 871
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 tcccatgtccgaaaccacaccgcaggacctcaagacacc 1487
>BF01049A2D11
Length = 776
Score = 202 bits (102), Expect = 1e-51
Identities = 148/162 (91%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 548 ttgtcatacattggacagacgaagaggagcatcggtacaagggttaaggaacacatctca 607
|||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 608 gatatcaa-aaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaacc 666
|| |||| ||| ||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 667 aggccactacattcgttttgataaacctcaaatcctcgctcg 708
||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF14_729_C1
Length = 981
Score = 194 bits (98), Expect = 4e-49
Identities = 132/142 (92%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 393 agggagttactgacagaataggcaacatcttgaagaaggtttccattaaaactatttaca 452
|||||||||||||||||||||||||||| ||||||||| ||||||| || |||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 453 aaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcctttacaac 512
|||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 513 aagcgggtgtatacaaactcga 534
||||||||||||||||||||||
Sbjct: 23 aagcgggtgtatacaaactcga 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,040
Number of extensions: 8798
Number of successful extensions: 8798
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8797
Number of HSP's successfully gapped: 4
Length of query: 1884
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1867
Effective length of database: 8,119,229
Effective search space: 15158600543
Effective search space used: 15158600543
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)