BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19767 (UTR included)
(2500 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1998_C1 3106 0.0
>BF14_1998_C1
Length = 1700
Score = 3106 bits (1567), Expect = 0.0
Identities = 1630/1651 (98%)
Strand = Plus / Plus
Query: 850 cgccgcagctgatagcgtctcacggatacgtctcagaatcccacacaattgtcacagaag 909
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgccgcacctgatagcgtctcacggatacgtctcagaatcccacacaattgtcacagaag 60
Query: 910 atggatacattctcacagttcataggataccatattcaagaaatgtttccagcagagagg 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggatacattctcacagttcataggataccatattcaagaaatgtttccagcagagagg 120
Query: 970 taccccgtaagacagtgttgctgcatcatggtttgctcggcagttcggctgattggatca 1029
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccgcgtaagacagtgttgctgcatcatggtttgctcggcagttcggctgattggatca 180
Query: 1030 tggcgggaccggaaaaggggctcggttatatactatcagacgcaggatatgatgtatggc 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcgggaccggaaaaggggctcggttatatactatcagacgcaggatatgatgtatggc 240
Query: 1090 ttgctaatgttagaggaaatacatattcaagagcccacatcacattgaaacccgattcct 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgctaatgttagaggaaatacatattcaagagcccacatcacattgaaacccgattcct 300
Query: 1150 ttgaattttggaatttcacgtttcacgaagttagtcaacacgatttgccggctgtcatag 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgaattttggaatttcacgtttcacgaagttagtcaacacgatttgccggctgtcatag 360
Query: 1210 attatataatggaagttaaaggatgggacgtcaagataaattatatcggtcactccatgg 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 attatataatggaagttaaaggatgggacgtcaagataaattatatcggtcactcaatgg 420
Query: 1270 gaacgactattctgttcgctttgttatcaacaaagactcattacaacaaagttctgagag 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaacgactattctgttcgctttgttatcaacaaagactcattacaacaaagttctgagag 480
Query: 1330 caggtttcgcgttagctcctgtcgcttttatgaccgatattaggagccctattcgcctcc 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 caggtttcgcgttagctcctgtcgcttttatgaccgatattaggagccctattcgtctcc 540
Query: 1390 ttgcaaaatacagtgataatctagaatatttgttaaaactactcggtactaatgaatttt 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgcaaaatacagtgataatctagaatatttgttaaaactactcggtactaatgaatttt 600
Query: 1450 taccacaaaattctgtattacgatggttatcgaaacacgcgtgtgaaataaatcattacg 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taccacaaaattctgtattacgatggttatcgaaacacgcgtgtgaaataaatcattacg 660
Query: 1510 aggaagcgatttgtgagaattcactattcattttatgtggccacgacgaacagcagttca 1569
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 661 aggaagcgatttgtgagaattccctattcattttatgtggccacgacgaacagcagttca 720
Query: 1570 atcgaagtctattaccaataatattgggccatgtgccggccggggcttcaactaagacct 1629
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atcgaagtctgttaccaataatattgggccatgtgccggccggggcttcaactaagacct 780
Query: 1630 tagttcattatgcacaagagataagaaacgcggggagatttcaacaattcgattacggtc 1689
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tagttcattatgcccaagagataagaaacgcggggagatttcaacaattcgattacggtc 840
Query: 1690 ccgaggggaatttgaaagagtatggaagcttcgatcctccacaatatcctctgcataaaa 1749
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cagaggggaatttgaaagagtatggaagcttcgatcctccacaatatcctctgcataaaa 900
Query: 1750 taaccctacctattgctctattcggatccgaaaatgattggctggcgagcgatgtggacg 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 taaccctacctattgctctattcggatccgaaaatgattggctggcgagcgatgtggacg 960
Query: 1810 taacgaatttatatgttcagctggccaatccaatagatcattacattgtgccgttaaaaa 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 taacgaatttatatgttcagctggccaatccaatagatcattacattgtgccgttaaaaa 1020
Query: 1870 cattcaaccacatcgacttcttgtgggctaaagacgcgaagaaattggtctttgacaaac 1929
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1021 cattcaaccacatcgacttcttgtgggctaaagacgcgaagaaattggtcttcgacaaac 1080
Query: 1930 tcttacaaatgttagaggagggtgttagcagaacgcattttgagtcggacttttctatta 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tcttacaaatgttagaggagggtgttagcagaacgcattttgagtcggacttttctatta 1140
Query: 1990 ataatatataatattaaaatagaccaagtcttttaatataaacaatataagtaaaaatat 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ataatatataatattaaaatagaccaagtcttttaatataaacaatataagtaaaaatat 1200
Query: 2050 gtatgtgatatttctattaagtactaacttcatttaaattcccgtcgtacattataagtt 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gtatgtgatatttctattaagtactaacttcatttaaattcccgtcgtacattataagtt 1260
Query: 2110 tactttattaaatagtgtgtagaaacatgggttatcttgaaatatttttttaattataag 2169
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1261 tactttattaaatagtgtgtagaaacatgggttatcttaaaatatttttttaattataag 1320
Query: 2170 agatagaatatggtaaagtaattttattttaattaaataacttatatgatatccacaata 2229
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 agatagaatatgatatagtaattttattttaattaaataacttatatgatatccacaata 1380
Query: 2230 actgttattccgtcattactatctacaagtatacaaaaacactacatatgactaattata 2289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 actgttattccgtcattactatctacaagtatacaaaaacactacatatgactaattata 1440
Query: 2290 attttatcaagagttcagggtcacaaacaaatatacgtatatagtaggtactcttcaatt 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1441 attttatcaagagttcagggtcacaaacaaatatacgtatatagtaggtactcctcaatt 1500
Query: 2350 taattctctttccttatactatagatcctaactgcttaactttagtaaaatgccacagtt 2409
| || |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1501 ttatcctctttccttatactatagatcctaactgcgtaactatagtaaaatgccacagtt 1560
Query: 2410 ggcatagccacggatgtctttaactcttaagtgcaaggaaattaaggatcttttaatttc 2469
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tgcatagccacggatgtctttaactcttaagtgcaaggaaattaaggatcttttaatttc 1620
Query: 2470 taacttcgctcccagcgcgtagaggttaaac 2500
||||| |||||| ||||||||||||||||||
Sbjct: 1621 taactccgctccgagcgcgtagaggttaaac 1651
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,990
Number of extensions: 8088
Number of successful extensions: 8088
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8086
Number of HSP's successfully gapped: 1
Length of query: 2500
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2483
Effective length of database: 8,119,229
Effective search space: 20160045607
Effective search space used: 20160045607
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)