BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19773 (UTR included)
(2129 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1H08 105 3e-22
>BF01037B1H08
Length = 758
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 533 aagtcgtggtggcctggaggttaaaagcccgtctctcatacgtgagggcgcgggttcgaa 592
||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 69 aagtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaa 128
Query: 593 acctggcaa 601
|||||||||
Sbjct: 129 acctggcaa 137
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,609
Number of extensions: 18380
Number of successful extensions: 18380
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18380
Number of HSP's successfully gapped: 1
Length of query: 2129
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2112
Effective length of database: 8,119,229
Effective search space: 17147811648
Effective search space used: 17147811648
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)