BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19775 (UTR included)
(3238 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2E06 1245 0.0
>BF01022A2E06
Length = 679
Score = 1245 bits (628), Expect = 0.0
Identities = 658/668 (98%)
Strand = Plus / Plus
Query: 1447 aactttcccttgtatttagcaatgagttagaaaagagcccaacacaagtgagtcagtcag 1506
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 12 aactttcccttgtatttagcaatgagttagaaaagagcccgacacaagtgagtcagtcag 71
Query: 1507 ttgaaattgattttcctaagcttttgaagtgtttcaatgacttactgtcaagattaaaat 1566
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tagaaattgattttcctaagcttttgaagtgtttcaatgacttactgtcaagattaaaat 131
Query: 1567 gtaaaaatttggaagtgaaccgttcaagcttgactaaatgggaaaattccttcctatcca 1626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gtaaaaatttggaagtgaaccgttcaagcttgactaaatgggaaaattccttcctatcca 191
Query: 1627 aatccttagctaagcttttggagccagttagaagcatgtggcatctgaaccaagtaccca 1686
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 192 aatccttagccaagcttttggaaccagttagaagcatgtggcatctgaaccaagtaccta 251
Query: 1687 atatggatcaaattgacaacgcaataagaataatagcagaagccctgagtatttcactcg 1746
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 252 atatggatcaaattgacaacgcaataagaataatagcagaagccctaagtatttcactcg 311
Query: 1747 gagacaaacaattaagcatcagtttggctcagagtgtcgcaaagagcgtcaaacagatga 1806
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gagataaacaattaagcatcagtttggctcagagtgtcgcaaagagcgtcaaacagatga 371
Query: 1807 atgtagaggcagaacaacgactctcaatggaaaatgatgtagcacaaataatagaggctc 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atgtagaggcagaacaacgactctcaatggaaaatgatgtagcacaaataatagaggctc 431
Query: 1867 caacgagctcccagcagagaaatgcagacctttgcaatgcgctgtattatttttcatccc 1926
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 432 caacgagctcccagcagagaaatgcagacctttgcaatgcgctgtattacttttcatcac 491
Query: 1927 aaatcaatagagtactaaccaatatgaattccctattgccacaagaaagtgtgcaaatcg 1986
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaatcaatagagtactgaccaatatgaattccctattgccacaagaaagtgtgcaaatcg 551
Query: 1987 tccaaaatagtctaaaaggtatatcaagtttgccagttctcaatttatatgccgattcta 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tccaaaatagtctaaaaggtatatcaagtttgccagttctcaatttatatgccgattcta 611
Query: 2047 tcaagaagtccatatatctcatcctggcgaccatgcacgacgaacccgatttgatcaaag 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcaagaagtccatatatctcatcctggcgaccatgcacgacgaacccgatttgatcaaag 671
Query: 2107 ctgatgat 2114
||||||||
Sbjct: 672 ctgatgat 679
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 389,430
Number of extensions: 7667
Number of successful extensions: 7667
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7667
Number of HSP's successfully gapped: 1
Length of query: 3238
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3220
Effective length of database: 8,109,745
Effective search space: 26113378900
Effective search space used: 26113378900
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)