BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19784 (UTR included)
(2293 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2B04 1259 0.0
>BF01042A2B04
Length = 735
Score = 1259 bits (635), Expect = 0.0
Identities = 707/731 (96%)
Strand = Plus / Plus
Query: 461 aaaaaaactttttattaatgtaaataatagattcataaaaatgtctaagaaaataaaaca 520
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aaaaaaactttttattattgtaaataatagattcataaaaatgtctaagaaaataaaaca 64
Query: 521 tttagtcgtagatacgactgctttcattcgtgctggtaatcttcaagatattgcaaatga 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tttagtcgtagatacgactgctttcattcgtgctggtaatcttcaagatattgcaaatga 124
Query: 581 aatatacacaattcaagaggtagtagacgaaattactaacgaccggcagcgtaaaaagct 640
||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 125 aatatacacaattcaagaggtggtagatgaaattaccaacgaccggcagcgtaaaaagct 184
Query: 641 cgtagtacttccatatgatttgaaaataaaagatgtatttactgaaaacatcaagttcgt 700
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 185 cgtagtacttccatatgatttgaaaataaaggatgtatttactgaaaacatcaagttcgt 244
Query: 701 tacggaattctcaaaaaagactggcgattataccagtctatcagcgaccgacataaaagt 760
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 245 tacggaattctcaaaaaagactggcgattataccagtctatcagcgactgacataaaagt 304
Query: 761 tatggctcttacataccaaatggaaaaagagtttcttggtacgaatcatttaaaatcaga 820
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 305 tatggctcttacatatcaaatggaaaaagagtttgttggtacgaatcatttaaaatcaga 364
Query: 821 acctactatgcaaaggactgttaaagtcagtggtctccctgcatttaacaataacacaga 880
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 365 acctactatgcaaaggactgttaaagtaagtggtctccctgcatttaacaataacacaga 424
Query: 881 agataaagaacacgtatctgaaacaaatgaccaaaaaagtgatggtgatagttcagggga 940
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 425 agataaagaacacgtatctgaaacaaattaccaaaaaagtgatagtgatagttcagggga 484
Query: 941 cgtcgaagaatacatcactgatgacaggaagcaaacaaatgaaacaaatactgaaaataa 1000
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cgtccaagaatacatcacagatgacaggaagcaaacaaatgaaacaaatactgaaaataa 544
Query: 1001 tcacgatattttgaaagatggggatgaaagtgacgatgacaataaattagcagaggagat 1060
|| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 acatggtatttcgaaagatggggatgaaagtgacgatgacaataaattagcagaggagat 604
Query: 1061 cgctgagcagataaaaaatatggatttaagagacgaatcggaagtcaatgattgtattgt 1120
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 605 tgctgagcagataaaaaatatggatttaagagatgaatcggaagtcaatgattgtattgt 664
Query: 1121 aaaagtatcagacgaagaatacagcgacagtcaagaaactgaggacgattccgacagtga 1180
||| ||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 665 aaaggtatctgacgaagaatacagtgatagtcaagaaactgaggaggattccgacagtga 724
Query: 1181 tgatggagact 1191
|||||||||||
Sbjct: 725 tgatggagact 735
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 373,589
Number of extensions: 9091
Number of successful extensions: 9091
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9091
Number of HSP's successfully gapped: 1
Length of query: 2293
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2276
Effective length of database: 8,119,229
Effective search space: 18479365204
Effective search space used: 18479365204
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)