BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19785 (UTR included)
(2113 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2492_C1 1522 0.0
BF01052A1B01 94 1e-18
>BF14_2492_C1
Length = 784
Score = 1522 bits (768), Expect = 0.0
Identities = 780/784 (99%)
Strand = Plus / Plus
Query: 360 gacaaacaaatgcgcattatcctttaaggactttaacttataattttctaagttatatgt 419
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gacaaacaaatgcgcattatcctttaaggactttaacttataattttcaaagttatatgt 60
Query: 420 ttattgatataatctaaaaactatcaaaatttttattgtatgtgttaagagagttttcta 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 ttattgatataatctaaaaactatcaaaatttttattgtaagtgttaagagagttttcta 120
Query: 480 attacaaaagaagagaaaaatatggcttcatcagagggaaatattcgccaaaacaaacat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attacaaaagaagagaaaaatatggcttcatcagagggaaatattcgccaaaacaaacat 180
Query: 540 tcaattccaattgatattttagatgatctttgcagtcgttttataataaatctgccgcct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaattccaattgatattttagatgatctttgcagtcgttttataataaatctgccgcct 240
Query: 600 gaagacaaagcgaatttggttcgaatctgtttccaaatagaattggcacattggttttat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagacaaagcgaatttggttcgaatctgtttccaaatagaattggcacattggttttat 300
Query: 660 ctggattactattgcaccgacgaaagcacaagactcaacccttgtggcatcagggaattt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggattactattgcaccgacgaaagcacaagactcaacccttgtggcatcagggaattt 360
Query: 720 gcagcacatatatttcagcatgtccctacacttcgtgagcatattaggaatcttgatgag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcagcacatatatttcagcatgtccctacacttcgtgagcatattaggaatcttgatgag 420
Query: 780 gttttggataactggagggagtacaagcaaactgttccaacatatggtgccatcctcctc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttttggataactggagggagtacaagcaaactgttccaacatatggtgccatcctcctc 480
Query: 840 gacactgacttgacacatgtattgttagtgcagtcatattgggcgaaggcgtcatggggt 899
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 gacactgacttgacacatgtattgttagtgcagtcatattgggcgaaggcatcatggggt 540
Query: 900 ttccctaaaggcaaggtcaatgaagatgaggaaccatggaaatgtgctagtagagaggtg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttccctaaaggcaaggtcaatgaagatgaggaaccatggaaatgtgctagtagagaggtg 600
Query: 960 ctagaagaaactggttttgatataagcaatcttattaataaacaagattatattgaagct 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctagaagaaactggttttgatataagcaatcttattaataaacaagattatattgaagct 660
Query: 1020 acaattcacgatcaaatcgctagattgtatattatagggaatatatcacgagatacaaag 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acaattcacgatcaaatcgctagattgtatattatagggaatatatcacgagatacaaag 720
Query: 1080 tttcaaccgcgaacaaggaatgagattaaagcctgtgaatggtttccaatagcggatcta 1139
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 721 tttcaaccgcgaacaaggaatgagattaaagcctgtgaatggtttcctatagcggatcta 780
Query: 1140 ccag 1143
||||
Sbjct: 781 ccag 784
>BF01052A1B01
Length = 861
Score = 93.7 bits (47), Expect = 1e-18
Identities = 125/150 (83%), Gaps = 7/150 (4%)
Strand = Plus / Plus
Query: 1961 tattactttaattacaaaacacaacagacttttcaaagaaaataattaaatgagtacgac 2020
||||||||||||||||||||||||| ||||||| ||||||| ||| |||| ||| ||
Sbjct: 377 tattactttaattacaaaacacaactgactttttaaagaaagtaactaaaactgta--ac 434
Query: 2021 ttcttggtaaatcacttgtttatttccaatttcacaaaataatgaacaattacatccaaa 2080
|||| ||||||||||||||| |||| ||||| ||||||| |||||||||||||
Sbjct: 435 ctcttcgtaaatcacttgtttgtttc-----acacaagataatgagtaattacatccaaa 489
Query: 2081 aaggctttttaaataatctctcctcccctc 2110
| ||| |||||||| ||||||||||||||
Sbjct: 490 gatgctctttaaatactctctcctcccctc 519
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,026
Number of extensions: 6997
Number of successful extensions: 6997
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6997
Number of HSP's successfully gapped: 2
Length of query: 2113
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2096
Effective length of database: 8,119,229
Effective search space: 17017903984
Effective search space used: 17017903984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)