BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN19788 (UTR included)
         (1903 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01062A1H02                                                          111   4e-24
BF14_2249_C1                                                           72   4e-12

>BF01062A1H02
          Length = 876

 Score =   bits (56), Expect = 4e-24
 Identities = 123/142 (86%), Gaps = 5/142 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1762 atatgtatcagtggcgtgcacagagatttggggtagggtaagctgaatatgttgaaaaaa 1821
            |||| |||||| |||||||||||||||| ||| |||||||||| |||||||||   ||||
Sbjct: 81   atatatatcaggggcgtgcacagagattcgggttagggtaagcagaatatgtt-tgaaaa 139

                                                                        
Query: 1822 aaaatacgaattttcatcataattttcacctctaaaacattgataacgataataaacatc 1881
            ||||||| ||||||||| ||||||| | |||||||| ||||||||   ||||| || |||
Sbjct: 140  aaaataccaattttcataataatttcctcctctaaaccattgata---ataatgaa-atc 195

                                  
Query: 1882 tttcgcaagtactcatttaaat 1903
            ||||||||||| ||||||||||
Sbjct: 196  tttcgcaagtattcatttaaat 217


>BF14_2249_C1
          Length = 1315

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1770 cagtggcgtgcacagagatttggggtagggtaagctgaatatgttgaaaaaaaaaatacg 1829
            ||||||||||||||||||||||||||||||| |||  ||||||||   |||||| |||| 
Sbjct: 227  cagtggcgtgcacagagatttggggtagggtgagcaaaatatgtttggaaaaaatatact 286

                        
Query: 1830 aattttcatcat 1841
            |||||| |||||
Sbjct: 287  aatttttatcat 298


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,723
Number of extensions: 5081
Number of successful extensions: 5081
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5079
Number of HSP's successfully gapped: 2
Length of query: 1903
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1886
Effective length of database: 8,119,229
Effective search space: 15312865894
Effective search space used: 15312865894
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)