BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19827 (UTR included)
(1846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1421_C1 2454 0.0
BF01030A1E09 127 7e-29
BF01061A2A11 100 2e-20
>BF14_1421_C1
Length = 1885
Score = 2454 bits (1238), Expect = 0.0
Identities = 1263/1270 (99%), Gaps = 1/1270 (0%)
Strand = Plus / Plus
Query: 577 aattggatttggattacctggagcggggtggcgtgcctgcattgcctgtacctgctccga 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aattggatttggattacctggagcggggtggcgtgcctgcattgcctgtacctgctccga 418
Query: 637 ctgtagagcccagccctgacactatagatctcgtcaaggtcatactgcttggagcaccag 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctgtagagcccagccctgacactatagatctcgtcaaggtcatactgcttggagcaccag 478
Query: 697 ccgtcggcaaaaccagcatcatccagcaatttgtctggagcgactttacagagcaataca 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ccgtcggcaaaaccagcatcatccagcaatttgtctggagcgactttacagagcaataca 538
Query: 757 taccaacggaacacaaacagacgttctatccgtcggtgatcataaacgagcatctgtacg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 taccaacggaacacaaacagacgttctatccgtcggtgatcataaacgagcatctgtacg 598
Query: 817 agcttaaaattacagatgtcccagtaataccatactttcccataaactcgtactacgaat 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agcttaaaattacagatgtcccagtaataccatactttcccataaactcgtactacgaat 658
Query: 877 gggcacattacagattttatggtctgcggaacgccaccgcctacatcttagtcttcgatc 936
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gggcacattacagattttacggtctgcggaacgccaccgcctacatcttagtcttcgatc 718
Query: 937 tggcgaacgttgaaacgtttcaatttatcagaaatctgagagaccaaatgttcgagagcc 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tggcgaacgttgaaacgtttcaatttatcagaaatctgagagaccaaatgttcgagagcc 778
Query: 997 gggacatgaaaaatgtaccggttcttgtagttggtaacaaacaggatttaatgtgcagca 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gggacatgaaaaatgtaccggttcttgtagttggtaacaaacaggatttaatgtgcagca 838
Query: 1057 gcactccgtcggggaccagtggtcttcaacagttagcgatggctgaaagcgcgtgcaccg 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 gcactccgtcggggaccagtggtcttcaacagttagcgatggctgaaagcgcgtgcaccg 898
Query: 1117 attccagagagaagagacggaatatcgtgaatcttgttcgcaaacactggaagtgcgcct 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 attccagagagaagagacggaatatcgtgaatcttgttcgcaaacactggaagtgcgcct 958
Query: 1177 acatagagtgctcggctaaatacaactggcgtgttatatccattttcaaagaattgatgg 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 acatagagtgctcggctaaatacaactggcgtgttatatccattttcaaagaattgatgg 1018
Query: 1237 agacgattgacgccatggagtggagtggaggaggaagaggttctgaaccaccgcccgact 1296
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1019 agacgattgacgccatggagtggagtggaggaggaagaagttctgaaccaccgcccgact 1078
Query: 1297 ccactgcagccggtgggaaatcacacgaaaaccgttgcgccgtttcttaagtcaattttc 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ccactgcagccggtgggaaatcacacgaaaaccgttgcgccgtttcttaagtcaattttc 1138
Query: 1357 tttttatcagtattgtttatagtaattgggttcaggcaatcgacagtgtagggctttact 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 tttttatcagtattgtttatagtaattgggttcaggcaatcgacagtgtagggctttact 1198
Query: 1417 tgcagtttaaaatcaaaccagttctgtaaagttataaaaaactattggcaattttaaatt 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 tgcagtttaaaatcaaaccagttctgtaaagttataaaaaactattggcaattttaaatt 1258
Query: 1477 aacgttgcattgttgtggttctctgattaaaggtcacgttcaaaagttttacgcgatagc 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 aacgttgcattgttgtggttctctgattaaaggtcacgttcaaaagttttacgcgatagc 1318
Query: 1537 tgtaactaaatagcgaaatggaaaagcagttttgcaatgtctggaacaactgtatagcac 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 tgtaactaaatagcgaaatggaaaagcagttttgcaatgtctggaacaactgtatagcac 1378
Query: 1597 aattggcgttacgctgcaaaattcaatgtctcaaatattgtttaacgggattatttgttt 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 aattggcgttacgctgcaaaattcaatgtctcaaatattgtttaacgggattatttgttt 1438
Query: 1657 tgtaataacttgtgttagaaaaaaaactatcatattttttctcgtcaaatcgatatacgt 1716
||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||
Sbjct: 1439 tgtaataacttgtgttagaaaaaaatctatcagactttttctcgtcaaatcgatatacgt 1498
Query: 1717 atatacttaacttaaaacgtcaacttagatattgaaaaaaaaaaaaattaaaaataattc 1776
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 1499 atatacttaacttaaaacgttaacttagatattg-aaaaaaaaaaaattaaaaataattc 1557
Query: 1777 tccatgatatcttagacgcaataatgagatactttcaaacgttaatgaacgtaataaaat 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1558 tccatgatatcttagacgcaataatgagatactttcaaacgttaatgaacgtaataaaat 1617
Query: 1837 tatgaaagtc 1846
||||||||||
Sbjct: 1618 tatgaaagtc 1627
>BF01030A1E09
Length = 779
Score = 127 bits (64), Expect = 7e-29
Identities = 100/112 (89%)
Strand = Plus / Minus
Query: 366 tactcaacggatttgaacgcggttttcacatttgcattacatataattaagagcattttt 425
|||||||||||| ||||||||||| ||||| ||| |||||||||||||| ||||||| |
Sbjct: 748 tactcaacggatctgaacgcggttctcacagttggattacatataattaggagcattgtc 689
Query: 426 aaaactttgtttcgtcaaaatcggttaatggaaaaataagttatgttcaatt 477
||||||||||||| |||||||||||||| ||||||| |||||| | ||||||
Sbjct: 688 aaaactttgtttcatcaaaatcggttaagggaaaaagaagttacggtcaatt 637
>BF01061A2A11
Length = 815
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 216 atatacatataataagacggtaaaaatcgaacgtctgtacattaaatatttttccaaaaa 275
|||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||
Sbjct: 102 atatacatataataagacagtaaaaattgaatgtctgtacaataaatatttttccaaaaa 161
Query: 276 actgat 281
||||||
Sbjct: 162 actgat 167
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,149
Number of extensions: 20481
Number of successful extensions: 20481
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 20480
Number of HSP's successfully gapped: 3
Length of query: 1846
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1829
Effective length of database: 8,119,229
Effective search space: 14850069841
Effective search space used: 14850069841
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)