BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19830 (UTR included)
(2170 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_141_C1 1980 0.0
>BF14_141_C1
Length = 1439
Score = 1980 bits (999), Expect = 0.0
Identities = 1014/1019 (99%)
Strand = Plus / Plus
Query: 496 caacaatgagcacctacttccaataccccacccccgaggttcaggaggagctgaagaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 caacaatgagcacctacttccaataccccacccccgaggttcaggaggagctgaagaaga 135
Query: 556 tcgcacaggcgatcgtcgcccccggcaagggtatcctcgccgctgacgagtccactggta 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tcgcacaggcgatcgtcgcccccggcaagggtatcctcgccgctgacgagtccactggta 195
Query: 616 ctatgggcaagcgtctgcaggacatcggtgtagagaatactgaggagaaccgccgcaagt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ctatgggcaagcgtctgcaggacatcggtgtagagaatactgaggagaaccgccgcaagt 255
Query: 676 accgccagctcctcttcagcagtgacccggcgctatcggagaacatctccggcgtgattc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 accgccagctcctcttcagcagtgacccggcgctatcggagaacatctccggcgtgattc 315
Query: 736 tgttccacgagacgctgtaccagaaggctgatgacggaacacccctggtgtccttgttgg 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgttccacgagacgctgtaccagaaggctgatgacggaacacccctggtgtccttgttgg 375
Query: 796 agaagcgaggcatcatccccgggatcaaggtcgacaagggtgtggtgccactgttcggtt 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agaagcgaggcatcatccccgggatcaaggtcgacaagggtgtggtgccactgttcggtt 435
Query: 856 cagaggacgagtgcactacacagggtttggatgatctcgcccagcgttgtgctcaataca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagaggacgagtgcactacacagggtttggatgatctcgcccagcgttgtgctcaataca 495
Query: 916 agaaggatggctgtcacttcgccaagtggcgttgcgtccttaagatcggccgattcaccc 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agaaggatggctgtcacttcgccaagtggcgttgcgtccttaagatcggccgattcaccc 555
Query: 976 cgtcctatcaggccattatggagaacgctaacgtattagctcgttatgcttccatctgcc 1035
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 catcctatcaggccattatggagaacgctaacgtattagctcgttatgcttccatctgcc 615
Query: 1036 agagccagcgcatcgtaccaatcgttgaacccgaagtactccctgatggtgagcacgacc 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agagccagcgcatcgtaccaatcgttgaacccgaagtactccctgatggtgagcacgacc 675
Query: 1096 ttgaccgcgctcagaaggtgactgaggtggtgctggcggccgtgtacaaggcgctcagcg 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ttgaccgcgctcagaaggtgactgaggtggtgctggcggccgtgtacaaggcgctcagcg 735
Query: 1156 accaccacgtgtaccttgaaggaactctactgaaaccaaacatggtgacagctggtcaat 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 accaccacgtgtaccttgaaggaactctactgaaaccaaacatggtgacagctggtcaat 795
Query: 1216 cctgcaagaagacttacactccaatggacatcggccgcgccaccgttacagctctgttga 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 cctgcaagaagacttacactccaatggacatcggccgcgccaccgttacagctctgttga 855
Query: 1276 gaaccgtaccagccgcagttcccggagtgactttcctttccggcggtcagtctgaggagg 1335
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaaccgtaccagctgcagttcccggagtgactttcctttccggcggtcagtctgaggagg 915
Query: 1336 aggcgtctgtcaatctgaacgccatcaacaccgtggacctgaagcggccttgggccttga 1395
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 916 aggcgtctgtcaatctgaacgccatcaacactgtggacctgaagcggccttgggccttga 975
Query: 1396 ccttcagctacggccgggcccttcaggcctctgtactgcgcgcttgggccggcaagaacg 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 ccttcagctacggccgggcccttcaggcctctgtactgcgcgcttgggccggcaagaacg 1035
Query: 1456 agaacctactcgccggacagcaggaactcctgaaacgtgctaaggctaacggtctagcc 1514
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1036 agaacctactcgccggacagcaggaactcctgaaacgtgctaaggcaaacggtcaagcc 1094
Score = 634 bits (320), Expect = 0.0
Identities = 351/360 (97%), Gaps = 1/360 (0%)
Strand = Plus / Plus
Query: 1575 gcaaacggtcaagccagccagggcaaatacgtcgctggatccgtaacaggtgtgggcgct 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gcaaacggtcaagccagccagggcaaatacgtcgctggatccgtaacaggtgtgggcgct 1139
Query: 1635 gaggccggtctctttgtagctaaccacgcgtactaaaaaatacaaaaaaaaaaaacgcat 1694
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1140 gaggccggtctctttgtagctaaccacgcgtattaaaaaacgcaaaaaaaaaaaacgcat 1199
Query: 1695 aaaacatatatgtatcaagtaatttcagtagctgttagcgaaattctttgatttactatt 1754
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1200 aaaacatatatgtatcaagtaatttcagtagcctgtagctaaattctttgatttactatt 1259
Query: 1755 agtggattttaatgataatttgaattttcattctctgctagttagctcttgcgttgacag 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 agtggattttaatgataatttgaattttcattctctgctagttagctcttgcgttgacag 1319
Query: 1815 atcgtctagattgtcgtaattttgtagttaactaaaaatttttggtagcgtctttttaca 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 atcgtctagattgtcgtaattttgtagttaactaaaaatttttggtagcgtctttttaca 1379
Query: 1875 aattatatacactgtggtcgttttttctattc-tgtaatttttattataaaatggctata 1933
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 1380 aattatatacactgtggtcgttttttctattcttgtaatttttattataaaatgactata 1439
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,704
Number of extensions: 21397
Number of successful extensions: 21397
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21396
Number of HSP's successfully gapped: 2
Length of query: 2170
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2153
Effective length of database: 8,119,229
Effective search space: 17480700037
Effective search space used: 17480700037
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)