BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19842 (UTR included)
(1741 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A2B03 882 0.0
BF01043A1A12 763 0.0
BF01007X1C02 686 0.0
>BF01062A2B03
Length = 801
Score = 882 bits (445), Expect = 0.0
Identities = 451/453 (99%)
Strand = Plus / Plus
Query: 500 cagggtggcgtctctcaccggctacgagcctcaggacctcatcgagaagaccctgtacca 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cagggtggcgtctctcaccggctacgagcctcaggacctcatcgagaagaccctgtacca 408
Query: 560 ctacatccacggcacggacgtgctgcacatgagatactcgcactgcacgctgctgaccaa 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctacatccacggcacggacgtgctgcacatgagatactcgcactgcacgctgctgaccaa 468
Query: 620 gggccaggtgacgtcgcgctactaccgcttcctgaccaagtccggcggctgggtgtggat 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gggccaggtgacgtcgcgctactaccgcttcctgaccaagtccggcggctgggtgtggat 528
Query: 680 gcagagctacgccaccatcgtgcacaactcccggtcctcgcgcccgcactgcatcgtgtc 739
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gcagagctacgcgaccatcgtgcacaactcccggtcctcgcgcccgcactgcatcgtgtc 588
Query: 740 cgtcaactacgtgctcagcgacgtggaggagaagaacctcgtcctcaacatagagcaggg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cgtcaactacgtgctcagcgacgtggaggagaagaacctcgtcctcaacatagagcaggg 648
Query: 800 cccgcccaaggcgagccccgagccgcagccgcccgccgccaaggcgccgcaccccgcggg 859
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 649 cccgcccaaggcgagccccgagccgcagccgcccgccgccaaggcgccgcaccccgtggg 708
Query: 860 cgaggacttcggcgacggctacggctatcccgagtacagcctgccggtcataccctcgta 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cgaggacttcggcgacggctacggctatcccgagtacagcctgccggtcataccctcgta 768
Query: 920 cgacgcgcacgaggactaccagaacggctacca 952
|||||||||||||||||||||||||||||||||
Sbjct: 769 cgacgcgcacgaggactaccagaacggctacca 801
>BF01043A1A12
Length = 580
Score = 763 bits (385), Expect = 0.0
Identities = 446/468 (95%), Gaps = 10/468 (2%)
Strand = Plus / Minus
Query: 1274 gcggggacagcgcggaggatagcttgtggagatggagtgtctgagggcgaaggtcgcgac 1333
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 580 gcggggacagcgcggaggatagcttgtggagatggagtgtcggagggcgaaggtcaagac 521
Query: 1334 agactcacacgcgcaaggtcaggtcggtgggaagtggacggatagcggacgcgccctgac 1393
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 520 agactcacacgcgcaaggtcaggtcggtgggaagtggacggacagcggacgcgccctgac 461
Query: 1394 ccgcctcacgagagggttcagtgattcactccagactgtccgtatttagtgcgacacgct 1453
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 460 ccgcctcacgagagggttcagtgactcactccagactgtccgtatttagtgcgacacgct 401
Query: 1454 aactcgcggttaggttagtgatatgatttggctcgtcgaattttatattttaaatttata 1513
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 400 aactcgcggttaggatagtgatataatttggctcgtcgaattttatattttaaatttata 341
Query: 1514 tgattttatatacatatatacatatatatctccgtgtgttcgttcgtcgtgagccgctgt 1573
| ||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 340 taattttatat----------atatatatctacgtgtgttcgttcgtcgtgagccgctgt 291
Query: 1574 aacctagctcacactgtctctaggcgtctgccaaatatcaaattagcgacaataatagtg 1633
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aacctagctcgtactgtctctaggcgtctgccaaatatcaaattagcgacaataatagtg 231
Query: 1634 tattcatagctttagacctgtataatctgtaaataagatagcggaggagaggaagcagta 1693
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 230 tattcatagctttagacctgtataatctgtaaataagatagcggaggagaggaaacagta 171
Query: 1694 ttaatgaacaaataaattaattagtctaagttactccttttataatct 1741
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttaatgaacaaataaattaattagtctaagttactccttttataatct 123
>BF01007X1C02
Length = 710
Score = 686 bits (346), Expect = 0.0
Identities = 349/350 (99%)
Strand = Plus / Plus
Query: 500 cagggtggcgtctctcaccggctacgagcctcaggacctcatcgagaagaccctgtacca 559
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 280 cagggtggcgtctctcaccggctacgagccccaggacctcatcgagaagaccctgtacca 339
Query: 560 ctacatccacggcacggacgtgctgcacatgagatactcgcactgcacgctgctgaccaa 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ctacatccacggcacggacgtgctgcacatgagatactcgcactgcacgctgctgaccaa 399
Query: 620 gggccaggtgacgtcgcgctactaccgcttcctgaccaagtccggcggctgggtgtggat 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gggccaggtgacgtcgcgctactaccgcttcctgaccaagtccggcggctgggtgtggat 459
Query: 680 gcagagctacgccaccatcgtgcacaactcccggtcctcgcgcccgcactgcatcgtgtc 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gcagagctacgccaccatcgtgcacaactcccggtcctcgcgcccgcactgcatcgtgtc 519
Query: 740 cgtcaactacgtgctcagcgacgtggaggagaagaacctcgtcctcaacatagagcaggg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cgtcaactacgtgctcagcgacgtggaggagaagaacctcgtcctcaacatagagcaggg 579
Query: 800 cccgcccaaggcgagccccgagccgcagccgcccgccgccaaggcgccgc 849
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cccgcccaaggcgagccccgagccgcagccgcccgccgccaaggcgccgc 629
Score = 167 bits (84), Expect = 7e-41
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1168 gcgccgcgccggacgggttcgccggcgtcatcgtggacaacacgcagttccacagcaacg 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcgccgcgccggacgggttcgccggcgtcatcgtggacaacacgcagttccacagcaacg 682
Query: 1228 agtacgtgcactgacggccggcagcggc 1255
|||||||||||||||||||||| |||||
Sbjct: 683 agtacgtgcactgacggccggcggcggc 710
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 174,658
Number of extensions: 4319
Number of successful extensions: 4319
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4319
Number of HSP's successfully gapped: 5
Length of query: 1741
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1724
Effective length of database: 8,119,229
Effective search space: 13997550796
Effective search space used: 13997550796
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)