BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19854 (UTR included)
(1577 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2B03 127 6e-29
BF01049B2D10 103 8e-22
BF14_3046_C1 78 5e-14
BF01044A1D01 68 5e-11
>BF01024A2B03
Length = 724
Score = 127 bits (64), Expect = 6e-29
Identities = 106/120 (88%)
Strand = Plus / Plus
Query: 1159 ataaacgcctttattccattcgacaaactccttcgtgtttcctccacacagtactcaaga 1218
|||| ||||||||||| ||||||||||||| ||||||||||||||| ||||||||| ||
Sbjct: 189 ataagcgcctttattcaattcgacaaactcgttcgtgtttcctccaaacagtactcggga 248
Query: 1219 ttataattagtccgacaaataaaaacgtcgacattggcggaacattttacgattccagtg 1278
|||||||| |||| |||||||||||||| ||||||||| || ||| ||||||||||||
Sbjct: 249 ttataattcgtcctacaaataaaaacgttgacattggcaaaatattcaacgattccagtg 308
>BF01049B2D10
Length = 821
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 1023 atctgtgatctgtactctcgcctctatttataccaaccgacactcattgttgtgaattca 1082
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 785 atctgttatctgtactctcgcctctatttataccaaccgacactcattgttgtgactaca 726
Query: 1083 cttgcgggtgac 1094
| ||| ||||||
Sbjct: 725 catgcaggtgac 714
>BF14_3046_C1
Length = 1016
Score = 77.8 bits (39), Expect = 5e-14
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 1203 cacacagtactcaagattataattagtccgacaaataaaaacgtcgacattggcggaaca 1262
|||||||||||| || |||||||| ||| |||||||||||||| ||||||||| || |
Sbjct: 924 cacacagtactcgagtttataattcctccaacaaataaaaacgttgacattggcaaaata 983
Query: 1263 ttttacgattccagtgcgaatgaagccatag 1293
|| |||||||||||||||| ||||||||||
Sbjct: 984 ttccacgattccagtgcgaa-gaagccatag 1013
>BF01044A1D01
Length = 742
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 1236 aataaaaacgtcgacattggcggaacattttacgattccagtgcgaatgaagccatag 1293
||||||||||| ||||||||| ||| ||| ||||||||||||| |||||||||||||
Sbjct: 246 aataaaaacgttgacattggcagaatattccacgattccagtgcaaatgaagccatag 189
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,503
Number of extensions: 5758
Number of successful extensions: 5758
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5758
Number of HSP's successfully gapped: 4
Length of query: 1577
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1560
Effective length of database: 8,119,229
Effective search space: 12665997240
Effective search space used: 12665997240
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)