BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19874 (UTR included)
(1189 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 111 3e-24
BF01056B1D02 94 6e-19
BF01049B1F01 82 2e-15
BF01037B1H08 80 9e-15
BF01023A2A12 80 9e-15
BF01014B2F02 76 1e-13
BF14_335_C4 76 1e-13
>BF01019A1H08
Length = 504
Score = 111 bits (56), Expect = 3e-24
Identities = 101/115 (87%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 606 cttaaacctacacctgggtctttttttccaggcactgtcgaagctcctctccctgca--g 663
|||||||||||||||||||| | ||||||||||| |||||||||||||||||| |
Sbjct: 478 cttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacg 419
Query: 664 ctatggacccggctcccgcacggtgaatccttttaatgctgagaggtttcatctc 718
| ||||||||||| |||||||||||||||| || |||||| ||||||||||||||
Sbjct: 418 cgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctc 364
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 177 ggtgcagggtccattgcgttgcagggagagaagctatgacaatgcctgggacttgcgacc 236
||||| |||||||| ||||||||||||||| |||| ||| ||||||||| ||||||||
Sbjct: 403 ggtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcctgggagttgcgacc 462
Query: 237 caggtgtaggtttaaggggctc 258
||||||||||||||||||||||
Sbjct: 463 caggtgtaggtttaaggggctc 484
>BF01056B1D02
Length = 778
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 1110 atcatcatcatcagtctatcggagcccactgctgagcaaaggcctcttcacacatgaag 1168
||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 743 atcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatgaag 685
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 193 cgttgcagggagagaagctatgacaatgcctgggacttgcgacccaggtgtaggtttaag 252
|||||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtgtaag 646
Query: 253 gggctcaatctaa 265
|||| | ||||||
Sbjct: 647 gggccctatctaa 659
>BF01037B1H08
Length = 758
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 1110 atcatcatcatcagtctatcggagcccactgctgagcaaaggcctcttcacacatg 1165
||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 349 atcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatg 294
>BF01023A2A12
Length = 723
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 1110 atcatcatcatcagtctatcggagcccactgctgagcaaaggcctctt 1157
|||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 345 atcatcatcatcagcctatcggagctcactgctgagcaaaggcctctt 298
>BF01014B2F02
Length = 623
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 645 gaagctcctctccctgcagctatggacccggctcccgcacggtgaatccttttaatgctg 704
|||||||||||||||||| | |||||||||| ||||||||||| |||| | |||||||
Sbjct: 592 gaagctcctctccctgcaacgctggacccggcacccgcacggtgcatccactgaatgctg 533
Query: 705 agaggtttcatctc 718
||||||||| ||||
Sbjct: 532 agaggtttcgtctc 519
>BF14_335_C4
Length = 1491
Score = 75.8 bits (38), Expect = 1e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 219 tgcctgggacttgcgacccaggtgtaggtttaaggggc 256
||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 tgcctgggacttgcgacccaggtgtaggtttaaggggc 1247
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 154,206
Number of extensions: 7292
Number of successful extensions: 7292
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 7291
Number of HSP's successfully gapped: 8
Length of query: 1189
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1172
Effective length of database: 8,119,229
Effective search space: 9515736388
Effective search space used: 9515736388
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)