BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19885 (UTR included)
(2623 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1A08 1041 0.0
>BF01034B1A08
Length = 791
Score = 1041 bits (525), Expect = 0.0
Identities = 531/533 (99%)
Strand = Plus / Plus
Query: 1567 agtcattaaactgccccagcgagagattcgtgtcaccgcgcaaaacgaacgaaagcttcg 1626
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9 agtcattaaactgccccagcgagagattcgtgtcaccacgcaaaacgaacgaaagcttcg 68
Query: 1627 acagtgagaacatatgcaccagtcccacgaatgatacaacagtgctgcctgtactcaggc 1686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 acagtgagaacatatgcaccagtcccacgaatgatacaacagtgctgcctgtactcaggc 128
Query: 1687 atctcaggcccgaatttcgagctcaactgccagtgctctcaccgcggaagagcttgaagt 1746
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 129 atctcaggcccgaatttcgagctcaactgccagtgctctcaccgcggaagagcttgaaat 188
Query: 1747 ccgatctctcgcctcagaagctggaacaagacattccggaagcgaaaaagactgaattgg 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccgatctctcgcctcagaagctggaacaagacattccggaagcgaaaaagactgaattgg 248
Query: 1807 tcgaaaccagcgaagtgaccaatggcctatctgtgatagatttaaacaaaccagtgaaag 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tcgaaaccagcgaagtgaccaatggcctatctgtgatagatttaaacaaaccagtgaaag 308
Query: 1867 aaaattgtgaaagtgaaaaagttaacggtgatgtggttaaagatggacattacttcttgg 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaaattgtgaaagtgaaaaagttaacggtgatgtggttaaagatggacattacttcttgg 368
Query: 1927 atttggagaagaaggaaactgaaaggttgattgctctggccgtgggcgctgaaaaggagt 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atttggagaagaaggaaactgaaaggttgattgctctggccgtgggcgctgaaaaggagt 428
Query: 1987 tggagcacttgcagaatgttgacaatgtaagtgaagaagtgctgggcttcctccgagctg 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tggagcacttgcagaatgttgacaatgtaagtgaagaagtgctgggcttcctccgagctg 488
Query: 2047 cctctggcaaggcgaggctgttggccacacagaagatgcagcagtttgaaggt 2099
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cctctggcaaggcgaggctgttggccacacagaagatgcagcagtttgaaggt 541
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,989
Number of extensions: 3279
Number of successful extensions: 3279
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3279
Number of HSP's successfully gapped: 1
Length of query: 2623
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2606
Effective length of database: 8,119,229
Effective search space: 21158710774
Effective search space used: 21158710774
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)