BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19901 (UTR included)
(2200 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2568_C1 1980 0.0
>BF14_2568_C1
Length = 1085
Score = 1980 bits (999), Expect = 0.0
Identities = 1005/1007 (99%)
Strand = Plus / Plus
Query: 538 caccaacagtggatagattacacaaaatgatggacggtggagtagtgcacccccatccag 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 caccaacagtggatagattacacaaaatgatggacggtggagtagtgcacccccatccag 138
Query: 598 gcgtggtgcatggaggtgttccagttatccacgggatgccggtccacgcgggtcccgaca 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gcgtggtgcatggaggtgttccagttatccacgggatgccggtccacgcgggtcccgaca 198
Query: 658 gcgaacacgctccacaccctcgccggcgatatcctaacagacccaagcctatcaataacc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gcgaacacgctccacaccctcgccggcgatatcctaacagacccaagcctatcaataacc 258
Query: 718 tcgaaaggctacctcttgatgaagcagcgaaacgggaaatggaatctctccctatgaaaa 777
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 259 tcgaaaggctacctcttgatgaagcagctaaacgggaaatggaatctctccctatgaaaa 318
Query: 778 caccagtatcagtgcttcaagagcttctggctagacgaggcacagttcccaaatatgaat 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 caccagtatcagtgcttcaagagcttctggctagacgaggcacagttcccaaatatgaat 378
Query: 838 tagttcagatcgagggtatgatccatgaacccacatttcgttatcgagtaactgttgctg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tagttcagatcgagggtatgatccatgaacccacatttcgttatcgagtaactgttgctg 438
Query: 898 atcttgttgctttaggcactggaagatcaaagaaggaggccaaacattcagccgcaaagg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atcttgttgctttaggcactggaagatcaaagaaggaggccaaacattcagccgcaaagg 498
Query: 958 ctttgttggataaacttactggcgctacaccagccgatcagcccaccaatggaacagtcc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctttgttggataaacttactggcgctacaccagccgatcagcccaccaatggaacagtcc 558
Query: 1018 cggaaacaagtactgtggtgtcgtcctttgaagataaattaatgggcaaccctgtgggat 1077
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cggaaacaagtacagtggtgtcgtcctttgaagataaattaatgggcaaccctgtgggat 618
Query: 1078 ggcttcaggaactttgtatgtctcgtttttggccaccgccttcctaccacgctgagaatg 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggcttcaggaactttgtatgtctcgtttttggccaccgccttcctaccacgctgagaatg 678
Query: 1138 atgataatgttgccagacgtctgccacacgagcgccagttcactataatatgtactctgc 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atgataatgttgccagacgtctgccacacgagcgccagttcactataatatgtactctgc 738
Query: 1198 ttaaacgtcgtgaagtaggtacggggaaatcaaagaaacttgccaaacgtcaagcggctt 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttaaacgtcgtgaagtaggtacggggaaatcaaagaaacttgccaaacgtcaagcggctt 798
Query: 1258 acaaaatgtggcaagcattgcaggataatccaccagaagtttttcaaccagaggaagagg 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 acaaaatgtggcaagcattgcaggataatccaccagaagtttttcaaccagaggaagagg 858
Query: 1318 gcggtgtagcggcgagatatgccgatttgaaagatagtaaaataacaacactcacaacca 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 gcggtgtagcggcgagatatgccgatttgaaagatagtaaaataacaacactcacaacca 918
Query: 1378 gccatagccacaaagtgtcgcagttccacaaacatctcaaacagtctgtgggacccaacc 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 gccatagccacaaagtgtcgcagttccacaaacatctcaaacagtctgtgggacccaacc 978
Query: 1438 tggtcaagttgcaggtaacaccgctcaacaacaaggatttcaattttgttcagttcttac 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 tggtcaagttgcaggtaacaccgctcaacaacaaggatttcaattttgttcagttcttac 1038
Query: 1498 aagaaattgcatcggagcagtcctttgaagtgacatatgttgatata 1544
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 aagaaattgcatcggagcagtcctttgaagtgacatatgttgatata 1085
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,839
Number of extensions: 7301
Number of successful extensions: 7301
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7301
Number of HSP's successfully gapped: 1
Length of query: 2200
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2183
Effective length of database: 8,119,229
Effective search space: 17724276907
Effective search space used: 17724276907
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)