BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19923 (UTR included)
(2710 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1027_C1 1620 0.0
BF14_3518_C1 1007 0.0
>BF14_1027_C1
Length = 825
Score = 1620 bits (817), Expect = 0.0
Identities = 823/825 (99%)
Strand = Plus / Plus
Query: 478 ataattcaccaatacgacagataatgaccattattgaacataaaatccggaacttggaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataattcaccaatacgacagataatgaccattattgaacataaaatccggaacttggaaa 60
Query: 538 aaaggaagggcaaattaacatcgtaccgtgatttgcaaaaagccggtaaggaattaaaca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaggaagggcaaattaacatcgtaccgtgatttgcaaaaagccggtaaggaattaaaca 120
Query: 598 gtgatcaaaaggaagcggtggccaagtatgatgaggtggttataaccctagagttcgcta 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgatcaaaaggaagcggtggccaagtatgatgaggtggttataaccctagagttcgcta 180
Query: 658 gagacctctcgaaacaagtggctttgatagctatagcgtcagaacgtgaagccaagaaac 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagacctctcgaaacaagtggctttgatagctatagcgtcagaacgtgaagccaagaaac 240
Query: 718 aagctaagaaggatgcctgggttcgttatacggcagacacgaataaaatacgtgaggtac 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagctaagaaggatgcctgggttcgttatacggcagacacgaataaaatacgtgaggtac 300
Query: 778 tccttatattggactgcctcatgcagctgggtaacgcggaagttagagacgacttcctta 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccttatattggactgcctcatgcagctgggtaacgcggaagttagagacgacttcctta 360
Query: 838 atggtaccaatggtgcagtgaaattaactgaggaggatttaaaaatcttagataacttgt 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggtaccaatggtgcagtgaaattaactgaggaggatttaaaaatcttagataacttgt 420
Query: 898 atcctgaagtgacccctaaacatgaagtgaatgaagaaggccagcctggttttcatgcgt 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 atcctgaagtgacccctaaacatgaagtgaatgaagaaggccagcctggttttcatgcat 480
Query: 958 atacaataaaagctgcggaacatctgtatgctattattgatggaaaacccaaagaagtcc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atacaataaaagctgcggaacatctgtatgctattattgatggaaaacccaaagaagtcc 540
Query: 1018 tcggcaccacatatgcccatgtcaaggaaatagtcacggccgttcatgagtgtggctact 1077
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 541 tcggcaccacatatgcccatgtcaaggaaatagtcacggccgtacatgagtgtggctact 600
Query: 1078 ttgataaatcagctgatgttatccctgaaccagaggagatacagaatgtgtgtgaagaag 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgataaatcagctgatgttatccctgaaccagaggagatacagaatgtgtgtgaagaag 660
Query: 1138 caccagaacagacggaagaaattgaggagtctgagcctgctccaatgtatgtggcccctg 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caccagaacagacggaagaaattgaggagtctgagcctgctccaatgtatgtggcccctg 720
Query: 1198 tccctatgtcagccccaccggcagccgtagttcctgccccaggatacccactaagaccga 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tccctatgtcagccccaccggcagccgtagttcctgccccaggatacccactaagaccga 780
Query: 1258 tcccccccatcacccttcaagaaattgagaatgcttatttctcac 1302
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tcccccccatcacccttcaagaaattgagaatgcttatttctcac 825
>BF14_3518_C1
Length = 536
Score = 1007 bits (508), Expect = 0.0
Identities = 521/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Plus
Query: 2142 acacggggcgctccacgcacgccgcgcacgaaccatcagtacaaccgtaaacaggaaaac 2201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acacggggcgctccacgcacgccgcgcacgaaccatcagtacaaccgtaaacaggaaaac 60
Query: 2202 gtggaatagtacgtgaacggtcgaacctcggactaaatcattcgcgaaaggcaaatttca 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggaatagtacgtgaacggtcgaacctcggactaaatcattcgcgaaaggcaaatttca 120
Query: 2262 ccggcaacaacgctgtggtaacaaacaagagattacgctatataaaataaacaaatgaaa 2321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccggcaacaacgctgtggtaacaaacaagagattacgctatataaaataaacaaatgaaa 180
Query: 2322 aaaaatatataaaaaaaaagtaaaataatgaaactgaataaaaaataagttacttgaatt 2381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaaatatataaaaaaaaagtaaaataatgaaactgaataaaaaataagttacttgaatt 240
Query: 2382 tagatgtatgatatatgcgtttattgtaagttacgttaaatctagattcttgtatagtcg 2441
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagatgtacgatatatgcgtttattgtaagttacgttaaatctagattcttgtatagtcg 300
Query: 2442 tagcgacgcgccgcggctcggccgtcgtcgaacctcgtacgtgcctcgtactcgtgataa 2501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagcgacgcgccgcggctcggccgtcgtcgaacctcgtacgtgcctcgtactcgtgataa 360
Query: 2502 tttaagtactggataaaaataaaacatgacaaataccctagaccggggaccctttccaaa 2561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttaagtactggataaaaataaaacatgacaaataccctagaccggggaccctttccaaa 420
Query: 2562 tctcatcgactttttttatacagttcgtttaaaaattgcaattatatgtgttgagatgag 2621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctcatcgactttttttatacagttcgtttaaaaattgcaattatatgtgttgagatgag 480
Query: 2622 ccatgtttttatttatcagctgccttgtacagaacaggttttaa 2665
|||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 481 ccatgttttt-tttatcagctgcctcgtacagaacaggttttaa 523
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 301,074
Number of extensions: 6121
Number of successful extensions: 6121
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6120
Number of HSP's successfully gapped: 2
Length of query: 2710
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2693
Effective length of database: 8,119,229
Effective search space: 21865083697
Effective search space used: 21865083697
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)