BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19935 (UTR included)
(3769 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B1A10 1495 0.0
>BF01028B1A10
Length = 770
Score = 1495 bits (754), Expect = 0.0
Identities = 760/762 (99%)
Strand = Plus / Plus
Query: 2913 gtgtcgccgctggtgcgaggcaacaagatcttcagcaaccaagacgccgtggagaaggct 2972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtgtcgccgctggtgcgaggcaacaagatcttcagcaaccaagacgccgtggagaaggct 68
Query: 2973 gttggcggcggacagtgcctgtacaagatatcctcgtacacctccttcccgatgcatgat 3032
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gttggcggcggacagtgcttgtacaagatatcctcgtacacctccttcccgatgcatgat 128
Query: 3033 ttctatagatgccagacatgtaacacgactgatcgtaatgccatatgtgtcaattgcatc 3092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttctatagatgccagacatgtaacacgactgatcgtaatgccatatgtgtcaattgcatc 188
Query: 3093 aagacatgccattctggacatgacgtggaatttatacgccatgacagattcttctgcgac 3152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aagacatgccattctggacatgacgtggaatttatacgccatgacagattcttctgcgac 248
Query: 3153 tgcggtgctgggactctgtccaaccagtgccagttgcagggcgagcctacccaggacacg 3212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgcggtgctgggactctgtccaaccagtgccagttgcagggcgagcctacccaggacacg 308
Query: 3213 gacacgctgtacgactcagccgcgccgatggagtcgcacacgctcatggtcaactgaacc 3272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gacacgctgtacgactcagccgcgccgatggagtcgcacacgctcatggtcaactgaacc 368
Query: 3273 gaactaccatccccaccgccccacgaaacacccacacacaactatttttattacctaatc 3332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaactaccatccccaccgccccacgaaacacccacacacaactatttttattacctaatc 428
Query: 3333 cgccacctatgaatcgctgccgtgaggtcgttattttaatcgtcacgtgtagacgacact 3392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cgccacctatgaatcgctgccgtgaggtcgttattttaatcgtcacgtgtagacgacact 488
Query: 3393 ttatatgtaacgtagtgacgttttatcatccgtacttaatgtatatgtcgtgtagtatca 3452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttatatgtaacgtagtgacgttttatcatccgtacttaatgtatatgtcgtgtagtatca 548
Query: 3453 tgcattcccgaaattgtaatcgtcgagtcctcgattcacgttgttgatatttagagtaat 3512
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 549 tgcattcccgaaattgtaatcgtcgagttctcgattcacgttgttgatatttagagtaat 608
Query: 3513 catttgtgtcataagatattctgatagcggcccttattgataatgtctcatgttatagat 3572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 catttgtgtcataagatattctgatagcggcccttattgataatgtctcatgttatagat 668
Query: 3573 gtgtaatcgactgacggcaaacattttattttcgatcggaacggagtcgggtctatgtcg 3632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gtgtaatcgactgacggcaaacattttattttcgatcggaacggagtcgggtctatgtcg 728
Query: 3633 tttgtatgtaactatatgtaaccagcgactgtgacatcgggt 3674
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tttgtatgtaactatatgtaaccagcgactgtgacatcgggt 770
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 341,076
Number of extensions: 6686
Number of successful extensions: 6686
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6686
Number of HSP's successfully gapped: 1
Length of query: 3769
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3751
Effective length of database: 8,109,745
Effective search space: 30419653495
Effective search space used: 30419653495
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)