BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19936 (UTR included)
(2152 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B1C11 1530 0.0
>BF01016B1C11
Length = 792
Score = 1530 bits (772), Expect = 0.0
Identities = 787/792 (99%)
Strand = Plus / Plus
Query: 307 aaatggctaaaattagaaaaaataatactagaatttagtttaaatatcaaacaaatagca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatggctaaaattagaaaaaataatactagaatttagtttaaatatcaaacaaatagca 60
Query: 367 ttttgtgattattaaataatatttttagtgtaatgtttcaacaatatttttagtttaatg 426
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgtgattgttaaataatatttttagtgtaatgtttcaacaatatttttagtttaatg 120
Query: 427 gttttattaaaattactatattgcaaaacattccttagtacatagtttatttgatcaaag 486
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttttattataattactatattgcaaaacattccttagtacatagtttatttgatcaaag 180
Query: 487 aattgccgtaaattatgattgagctctcagccaaacttaccactggcagtgtttatttag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattgccgtaaattatgattgagctctcagccaaacttaccactggcagtgtttatttag 240
Query: 547 ctggagaggctttggaatgtcgtatatctttttgtcatacaactcaacctgaacatagaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggagaggctttggaatgtcgtatatctttttgtcatacaactcaacctgaacatagaa 300
Query: 607 aatcacaaagccatagtgatatcctggaaaatttggcatgggcttccgctcaaatacatt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatcacaaagccatagtgatatcctggaaaatttggcatgggcttccgctcaaatacatt 360
Query: 667 gtttcttttcaacatctaaaaataccacagacaaaaatgttattgcagaaaaaacaacag 726
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtttcttttcaacgtctaaaaataccacagacaaaaatgttattgcagaaaaaacaacag 420
Query: 727 ctctcgaagtaacctcatgtgatataggagatgtggtatttcatactaaacctaagatat 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctctcgaagtaacctcatgtgatataggagatgtggtatttcatactaaacctaagatat 480
Query: 787 tgttttgtgacttaactataccactcggggaaacaaagacttttttgtatcgagaaactc 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgttttgtgacttaactataccactcggggaaacaaagacttttttgtatcgagaaactc 540
Query: 847 tgccattagaagcacctccatcatacagaggcacggcagttaaatactcctacaagatca 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgccattagaagcacctccatcatacagaggcacggcagttaaatactcctacaagatca 600
Query: 907 caatagccacacagaaagttgggtctcatatcaaaatggtccgtttaccgtttagagtac 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caatagccacacagaaagttgggtctcatatcaaaatggtccgtttaccgtttagagtac 660
Query: 967 tacctatcagtcctgttatgaacttgcaagaccttcctgctttgtgtgaaacaacagaca 1026
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 tacctatcagtcctgttatgaacttgcaagaccttcctgcgttgtgtgaaacaacagaca 720
Query: 1027 tactacaaccaaccagtccattttcagaaggtaggaaagttgaaactcatctgactatgg 1086
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tactgcaaccaaccagtccattttcagaaggtaggaaagttgaaactcatctgactatgg 780
Query: 1087 ccttacaagttt 1098
||||||||||||
Sbjct: 781 ccttacaagttt 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,394
Number of extensions: 7917
Number of successful extensions: 7917
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7915
Number of HSP's successfully gapped: 1
Length of query: 2152
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2135
Effective length of database: 8,119,229
Effective search space: 17334553915
Effective search space used: 17334553915
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)